Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 CNN2P10-201ENST00000443067 918 ntBASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 AC068587.10-201ENST00000641210 219 ntBASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC10Q9NYD6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
HOXC10Q9NYD6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
HOXC10Q9NYD6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.71■□□□□ 0.42
HOXC10Q9NYD6 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
HOXC10Q9NYD6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 CALR4P-201ENST00000431943 946 ntBASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 AP006547.1-201ENST00000563435 692 ntBASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 AC005695.3-201ENST00000614522 232 ntBASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 AL603764.1-201ENST00000636452 321 ntBASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 AC127383.1-201ENST00000444697 1800 ntBASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC10Q9NYD6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 FAM8A4P-201ENST00000435433 1213 ntBASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 AKR7A2P1-201ENST00000460134 915 ntBASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.69■□□□□ 0.42
HOXC10Q9NYD6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms