Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 MIR770-201ENST00000390219 98 ntBASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 INGX-202ENST00000489074 768 ntBASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 MEIS3P1-201ENST00000495167 958 ntBASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 SRD5A3P1-201ENST00000603021 949 ntBASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBQLN4Q9NRR5 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 AL121723.1-201ENST00000445194 1519 ntBASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 AC004840.1-201ENST00000636359 365 ntBASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBQLN4Q9NRR5 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 AL109954.1-202ENST00000564051 2148 ntBASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
UBQLN4Q9NRR5 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms