Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SIX2Q9NPC8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIX2Q9NPC8 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.69■□□□□ 0.26
SIX2Q9NPC8 AC055876.3-201ENST00000431496 288 ntBASIC16.69■□□□□ 0.26
SIX2Q9NPC8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.69■□□□□ 0.26
SIX2Q9NPC8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.69■□□□□ 0.26
SIX2Q9NPC8 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SIX2Q9NPC8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SIX2Q9NPC8 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.69■□□□□ 0.26
SIX2Q9NPC8 AC138649.4-201ENST00000612222 287 ntBASIC16.69■□□□□ 0.26
SIX2Q9NPC8 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SIX2Q9NPC8 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIX2Q9NPC8 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIX2Q9NPC8 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.69■□□□□ 0.26
SIX2Q9NPC8 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.69■□□□□ 0.26
SIX2Q9NPC8 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SIX2Q9NPC8 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SIX2Q9NPC8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.69■□□□□ 0.26
SIX2Q9NPC8 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIX2Q9NPC8 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIX2Q9NPC8 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SIX2Q9NPC8 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 AL390754.1-201ENST00000619088 582 ntBASIC16.68■□□□□ 0.26
SIX2Q9NPC8 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIX2Q9NPC8 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 MRPS18AP1-201ENST00000414458 589 ntBASIC16.67■□□□□ 0.26
SIX2Q9NPC8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 IGHV3-42-201ENST00000520410 361 ntBASIC16.67■□□□□ 0.26
SIX2Q9NPC8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.67■□□□□ 0.26
SIX2Q9NPC8 CLK3P2-201ENST00000427566 1453 ntBASIC16.67■□□□□ 0.26
SIX2Q9NPC8 BTBD7P1-201ENST00000447253 1453 ntBASIC16.67■□□□□ 0.26
SIX2Q9NPC8 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms