Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 FAM207CP-201ENST00000443486 507 ntBASIC13.39□□□□□ -0.27
GCM1Q9NP62 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 AC097359.3-201ENST00000603982 1210 ntBASIC13.39□□□□□ -0.27
GCM1Q9NP62 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 AP002414.2-201ENST00000591780 3365 ntBASIC13.38□□□□□ -0.27
GCM1Q9NP62 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GCM1Q9NP62 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GCM1Q9NP62 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GCM1Q9NP62 AL607033.1-201ENST00000623900 1599 ntBASIC13.38□□□□□ -0.27
GCM1Q9NP62 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 PRAL-201ENST00000624952 3286 ntBASIC13.38□□□□□ -0.27
GCM1Q9NP62 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GCM1Q9NP62 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GCM1Q9NP62 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GCM1Q9NP62 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GCM1Q9NP62 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GCM1Q9NP62 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GCM1Q9NP62 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GCM1Q9NP62 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GCM1Q9NP62 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 MIR4313-201ENST00000580760 101 ntBASIC13.38□□□□□ -0.27
GCM1Q9NP62 RN7SL204P-201ENST00000582831 262 ntBASIC13.38□□□□□ -0.27
GCM1Q9NP62 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GCM1Q9NP62 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GCM1Q9NP62 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GCM1Q9NP62 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.38□□□□□ -0.27
GCM1Q9NP62 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GCM1Q9NP62 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GCM1Q9NP62 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GCM1Q9NP62 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms