Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 AC009477.1-201ENST00000452936 217 ntBASIC13.71□□□□□ -0.21
CDH20Q9HBT6 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.71□□□□□ -0.21
CDH20Q9HBT6 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDH20Q9HBT6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDH20Q9HBT6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDH20Q9HBT6 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CDH20Q9HBT6 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CDH20Q9HBT6 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
CDH20Q9HBT6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
CDH20Q9HBT6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDH20Q9HBT6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDH20Q9HBT6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDH20Q9HBT6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDH20Q9HBT6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDH20Q9HBT6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CDH20Q9HBT6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDH20Q9HBT6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CDH20Q9HBT6 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 SLED1-202ENST00000512051 380 ntBASIC13.7□□□□□ -0.22
CDH20Q9HBT6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 MIR4313-201ENST00000580760 101 ntBASIC13.7□□□□□ -0.22
CDH20Q9HBT6 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 AC097359.3-201ENST00000603982 1210 ntBASIC13.7□□□□□ -0.22
CDH20Q9HBT6 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 Z97205.2-201ENST00000564697 1639 ntBASIC13.7□□□□□ -0.22
CDH20Q9HBT6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH20Q9HBT6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.69□□□□□ -0.22
CDH20Q9HBT6 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms