Protein–RNA interactions for Protein: Q9H0U4

RAB1B, Ras-related protein Rab-1B, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1BQ9H0U4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAB1BQ9H0U4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAB1BQ9H0U4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAB1BQ9H0U4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 BAATP1-201ENST00000412284 1225 ntBASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 CYP2T1P-202ENST00000641596 2535 ntBASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 AC006449.5-201ENST00000610658 2098 ntBASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 DRD5P1-201ENST00000456605 1438 ntBASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RAB1BQ9H0U4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 ACKR1-201ENST00000368121 1240 ntBASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 KRT223P-202ENST00000449164 1292 ntBASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 KLF2P4-201ENST00000451959 1225 ntBASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB1BQ9H0U4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms