Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
IFT43Q96FT9 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.16■□□□□ 0.18
IFT43Q96FT9 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.16■□□□□ 0.18
IFT43Q96FT9 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.16■□□□□ 0.18
IFT43Q96FT9 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.16■□□□□ 0.18
IFT43Q96FT9 AC005225.4-201ENST00000557330 545 ntBASIC16.16■□□□□ 0.18
IFT43Q96FT9 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.16■□□□□ 0.18
IFT43Q96FT9 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.16■□□□□ 0.18
IFT43Q96FT9 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
IFT43Q96FT9 AL589739.1-201ENST00000607720 493 ntBASIC16.16■□□□□ 0.18
IFT43Q96FT9 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.16■□□□□ 0.18
IFT43Q96FT9 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFT43Q96FT9 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT43Q96FT9 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT43Q96FT9 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
IFT43Q96FT9 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT43Q96FT9 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT43Q96FT9 AC087499.5-201ENST00000452760 1342 ntBASIC16.16■□□□□ 0.18
IFT43Q96FT9 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT43Q96FT9 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
IFT43Q96FT9 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.16■□□□□ 0.18
IFT43Q96FT9 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFT43Q96FT9 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFT43Q96FT9 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT43Q96FT9 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.15■□□□□ 0.18
IFT43Q96FT9 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT43Q96FT9 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT43Q96FT9 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT43Q96FT9 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT43Q96FT9 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT43Q96FT9 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT43Q96FT9 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT43Q96FT9 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IFT43Q96FT9 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT43Q96FT9 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.15■□□□□ 0.18
IFT43Q96FT9 PIN1P1-201ENST00000412108 996 ntBASIC16.15■□□□□ 0.18
IFT43Q96FT9 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.15■□□□□ 0.18
IFT43Q96FT9 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 CRB3P1-201ENST00000449338 276 ntBASIC16.15■□□□□ 0.18
IFT43Q96FT9 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.15■□□□□ 0.18
IFT43Q96FT9 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IFT43Q96FT9 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IFT43Q96FT9 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT43Q96FT9 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 AL450472.2-201ENST00000603663 1156 ntBASIC16.15■□□□□ 0.18
IFT43Q96FT9 AL359258.3-201ENST00000622910 2331 ntBASIC16.15■□□□□ 0.18
IFT43Q96FT9 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT43Q96FT9 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT43Q96FT9 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT43Q96FT9 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT43Q96FT9 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IFT43Q96FT9 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IFT43Q96FT9 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT43Q96FT9 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT43Q96FT9 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT43Q96FT9 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.15■□□□□ 0.18
IFT43Q96FT9 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT43Q96FT9 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
IFT43Q96FT9 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.14■□□□□ 0.18
IFT43Q96FT9 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.14■□□□□ 0.17
IFT43Q96FT9 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT43Q96FT9 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
IFT43Q96FT9 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT43Q96FT9 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
IFT43Q96FT9 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.14■□□□□ 0.17
IFT43Q96FT9 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT43Q96FT9 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT43Q96FT9 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT43Q96FT9 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
IFT43Q96FT9 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
IFT43Q96FT9 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IFT43Q96FT9 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IFT43Q96FT9 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
IFT43Q96FT9 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT43Q96FT9 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT43Q96FT9 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
IFT43Q96FT9 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IFT43Q96FT9 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms