Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.52■□□□□ 0.24
TIFAQ96CG3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TIFAQ96CG3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TIFAQ96CG3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.52■□□□□ 0.24
TIFAQ96CG3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TIFAQ96CG3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TIFAQ96CG3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TIFAQ96CG3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TIFAQ96CG3 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TIFAQ96CG3 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TIFAQ96CG3 RPSAP31-201ENST00000416648 895 ntBASIC16.52■□□□□ 0.24
TIFAQ96CG3 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.52■□□□□ 0.24
TIFAQ96CG3 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.52■□□□□ 0.24
TIFAQ96CG3 HIST2H2BB-201ENST00000449108 381 ntBASIC16.52■□□□□ 0.24
TIFAQ96CG3 AL353637.1-201ENST00000451571 732 ntBASIC16.52■□□□□ 0.24
TIFAQ96CG3 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.52■□□□□ 0.24
TIFAQ96CG3 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.52■□□□□ 0.24
TIFAQ96CG3 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.52■□□□□ 0.24
TIFAQ96CG3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.52■□□□□ 0.24
TIFAQ96CG3 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.52■□□□□ 0.24
TIFAQ96CG3 OR10B1P-201ENST00000601666 907 ntBASIC16.52■□□□□ 0.24
TIFAQ96CG3 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TIFAQ96CG3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TIFAQ96CG3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
TIFAQ96CG3 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
TIFAQ96CG3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.52■□□□□ 0.23
TIFAQ96CG3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TIFAQ96CG3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TIFAQ96CG3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.52■□□□□ 0.23
TIFAQ96CG3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TIFAQ96CG3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TIFAQ96CG3 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
TIFAQ96CG3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
TIFAQ96CG3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.52■□□□□ 0.23
TIFAQ96CG3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.52■□□□□ 0.23
TIFAQ96CG3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TIFAQ96CG3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TIFAQ96CG3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TIFAQ96CG3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 RNF216P1-203ENST00000404404 2427 ntBASIC16.51■□□□□ 0.23
TIFAQ96CG3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.51■□□□□ 0.23
TIFAQ96CG3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TIFAQ96CG3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.51■□□□□ 0.23
TIFAQ96CG3 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TIFAQ96CG3 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TIFAQ96CG3 AL627389.1-201ENST00000413508 1182 ntBASIC16.51■□□□□ 0.23
TIFAQ96CG3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.51■□□□□ 0.23
TIFAQ96CG3 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.51■□□□□ 0.23
TIFAQ96CG3 AC100850.1-201ENST00000506768 649 ntBASIC16.51■□□□□ 0.23
TIFAQ96CG3 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.51■□□□□ 0.23
TIFAQ96CG3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.51■□□□□ 0.23
TIFAQ96CG3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.51■□□□□ 0.23
TIFAQ96CG3 AC073413.1-201ENST00000603927 732 ntBASIC16.51■□□□□ 0.23
TIFAQ96CG3 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.51■□□□□ 0.23
TIFAQ96CG3 AP001065.2-201ENST00000617205 644 ntBASIC16.51■□□□□ 0.23
TIFAQ96CG3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.51■□□□□ 0.23
TIFAQ96CG3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TIFAQ96CG3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.51■□□□□ 0.23
TIFAQ96CG3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TIFAQ96CG3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TIFAQ96CG3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TIFAQ96CG3 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TIFAQ96CG3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TIFAQ96CG3 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TIFAQ96CG3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TIFAQ96CG3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TIFAQ96CG3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TIFAQ96CG3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.5■□□□□ 0.23
TIFAQ96CG3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.5■□□□□ 0.23
TIFAQ96CG3 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TIFAQ96CG3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.5■□□□□ 0.23
TIFAQ96CG3 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TIFAQ96CG3 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms