Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAPGEF4Q8WZA2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAPGEF4Q8WZA2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
RAPGEF4Q8WZA2 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC20.24■□□□□ 0.83
RAPGEF4Q8WZA2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC20.24■□□□□ 0.83
RAPGEF4Q8WZA2 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAPGEF4Q8WZA2 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAPGEF4Q8WZA2 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC20.24■□□□□ 0.83
RAPGEF4Q8WZA2 REEP1-202ENST00000453231 940 ntTSL 2 BASIC20.24■□□□□ 0.83
RAPGEF4Q8WZA2 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC20.24■□□□□ 0.83
RAPGEF4Q8WZA2 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAPGEF4Q8WZA2 PPY2P-201ENST00000582808 702 ntBASIC20.24■□□□□ 0.83
RAPGEF4Q8WZA2 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAPGEF4Q8WZA2 AL451050.2-201ENST00000606967 682 ntBASIC20.24■□□□□ 0.83
RAPGEF4Q8WZA2 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC20.24■□□□□ 0.83
RAPGEF4Q8WZA2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC20.24■□□□□ 0.83
RAPGEF4Q8WZA2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC20.24■□□□□ 0.83
RAPGEF4Q8WZA2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.24■□□□□ 0.83
RAPGEF4Q8WZA2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
RAPGEF4Q8WZA2 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAPGEF4Q8WZA2 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAPGEF4Q8WZA2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAPGEF4Q8WZA2 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAPGEF4Q8WZA2 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 EIF3FP3-201ENST00000434851 1086 ntBASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 RNF41-210ENST00000552244 716 ntTSL 3 BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 DIO1-215ENST00000610607 796 ntTSL 5 BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.23■□□□□ 0.83
RAPGEF4Q8WZA2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 AL662890.1-201ENST00000396818 632 ntBASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 NDUFAB1P1-201ENST00000404262 460 ntBASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 RN7SL713P-201ENST00000582127 302 ntBASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 OR10B1P-201ENST00000601666 907 ntBASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms