Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.85■□□□□ 0.45
U2AF1L4Q8WU68 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
U2AF1L4Q8WU68 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
U2AF1L4Q8WU68 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
U2AF1L4Q8WU68 CNN2P8-201ENST00000421872 913 ntBASIC17.85■□□□□ 0.45
U2AF1L4Q8WU68 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.85■□□□□ 0.45
U2AF1L4Q8WU68 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.85■□□□□ 0.45
U2AF1L4Q8WU68 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
U2AF1L4Q8WU68 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.85■□□□□ 0.45
U2AF1L4Q8WU68 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
U2AF1L4Q8WU68 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
U2AF1L4Q8WU68 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.85■□□□□ 0.45
U2AF1L4Q8WU68 MIR4321-201ENST00000592276 80 ntBASIC17.85■□□□□ 0.45
U2AF1L4Q8WU68 GGT4P-201ENST00000623672 1708 ntBASIC17.85■□□□□ 0.45
U2AF1L4Q8WU68 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
U2AF1L4Q8WU68 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
U2AF1L4Q8WU68 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
U2AF1L4Q8WU68 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
U2AF1L4Q8WU68 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 AC074338.1-201ENST00000416825 156 ntBASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 AC253536.4-201ENST00000440539 267 ntBASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 AC004898.1-201ENST00000451057 766 ntBASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 BX284668.4-201ENST00000453917 508 ntBASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 AC091804.1-201ENST00000486888 567 ntBASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 AC132872.4-202ENST00000622924 2756 ntBASIC17.84■□□□□ 0.45
U2AF1L4Q8WU68 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.83■□□□□ 0.45
U2AF1L4Q8WU68 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
U2AF1L4Q8WU68 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
U2AF1L4Q8WU68 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
U2AF1L4Q8WU68 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
U2AF1L4Q8WU68 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
U2AF1L4Q8WU68 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.83■□□□□ 0.45
U2AF1L4Q8WU68 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
U2AF1L4Q8WU68 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
U2AF1L4Q8WU68 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 LDHBP1-201ENST00000455730 1119 ntBASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 VDAC1P7-201ENST00000462417 847 ntBASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 AC005695.3-201ENST00000614522 232 ntBASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
U2AF1L4Q8WU68 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
U2AF1L4Q8WU68 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
U2AF1L4Q8WU68 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
U2AF1L4Q8WU68 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
U2AF1L4Q8WU68 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.82■□□□□ 0.44
U2AF1L4Q8WU68 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
U2AF1L4Q8WU68 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.82■□□□□ 0.44
U2AF1L4Q8WU68 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
U2AF1L4Q8WU68 AC007950.2-201ENST00000615045 2347 ntBASIC17.82■□□□□ 0.44
U2AF1L4Q8WU68 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.82■□□□□ 0.44
U2AF1L4Q8WU68 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
U2AF1L4Q8WU68 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
U2AF1L4Q8WU68 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
U2AF1L4Q8WU68 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms