Protein–RNA interactions for Protein: Q8TDM0

BCAS4, Breast carcinoma-amplified sequence 4, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4Q8TDM0 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 AC118758.2-201ENST00000614242 2813 ntBASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 AC093724.1-201ENST00000448659 1027 ntBASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.74■□□□□ 0.11
BCAS4Q8TDM0 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 AP005901.3-202ENST00000581653 237 ntBASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 AP006294.2-201ENST00000641667 209 ntBASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 AC019294.4-201ENST00000561777 2905 ntBASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
BCAS4Q8TDM0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BCAS4Q8TDM0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BCAS4Q8TDM0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BCAS4Q8TDM0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.72■□□□□ 0.11
BCAS4Q8TDM0 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC15.72■□□□□ 0.11
BCAS4Q8TDM0 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
BCAS4Q8TDM0 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
BCAS4Q8TDM0 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BCAS4Q8TDM0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BCAS4Q8TDM0 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
BCAS4Q8TDM0 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC15.72■□□□□ 0.11
BCAS4Q8TDM0 PI4KAP1-204ENST00000612579 1703 ntBASIC15.72■□□□□ 0.11
BCAS4Q8TDM0 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
BCAS4Q8TDM0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BCAS4Q8TDM0 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BCAS4Q8TDM0 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.72■□□□□ 0.11
BCAS4Q8TDM0 RCN1P2-201ENST00000398357 915 ntBASIC15.72■□□□□ 0.11
BCAS4Q8TDM0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BCAS4Q8TDM0 PRYP5-201ENST00000451909 266 ntBASIC15.72■□□□□ 0.11
BCAS4Q8TDM0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BCAS4Q8TDM0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms