Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SPDYE19P-201ENST00000338590 713 ntBASIC16.64■□□□□ 0.25
LMO3Q8TAP4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 RN7SL399P-201ENST00000471648 279 ntBASIC16.64■□□□□ 0.25
LMO3Q8TAP4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 RNA5SP421-201ENST00000516864 134 ntBASIC16.64■□□□□ 0.25
LMO3Q8TAP4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LMO3Q8TAP4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.63■□□□□ 0.25
LMO3Q8TAP4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 MIR770-201ENST00000390219 98 ntBASIC16.63■□□□□ 0.25
LMO3Q8TAP4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 FAM86LP-201ENST00000478302 853 ntBASIC16.63■□□□□ 0.25
LMO3Q8TAP4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 TPRX2P-201ENST00000535362 881 ntBASIC16.63■□□□□ 0.25
LMO3Q8TAP4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 MIR8072-201ENST00000614241 80 ntBASIC16.63■□□□□ 0.25
LMO3Q8TAP4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.63■□□□□ 0.25
LMO3Q8TAP4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LMO3Q8TAP4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 CICP23-201ENST00000605013 2741 ntBASIC16.62■□□□□ 0.25
LMO3Q8TAP4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LMO3Q8TAP4 AC026410.3-201ENST00000514280 936 ntBASIC16.62■□□□□ 0.25
LMO3Q8TAP4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms