Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH19Q8TAB3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 PKD1P5-201ENST00000532415 10291 ntBASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 AL121723.1-201ENST00000445194 1519 ntBASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 MIR661-201ENST00000384842 89 ntBASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 AL133267.1-201ENST00000398220 340 ntBASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 AC114501.2-201ENST00000439631 535 ntBASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 TERF1P3-201ENST00000505638 1227 ntBASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 RN7SL204P-201ENST00000582831 262 ntBASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 AC004461.2-201ENST00000629517 803 ntBASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH19Q8TAB3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 AC004890.2-204ENST00000481968 304 ntBASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms