Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 AC009090.5-201ENST00000624886 2285 ntBASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 TMBIM7P-203ENST00000641617 1718 ntBASIC18.01■□□□□ 0.47
CCDC148Q8NFR7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18■□□□□ 0.47
CCDC148Q8NFR7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18■□□□□ 0.47
CCDC148Q8NFR7 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CCDC148Q8NFR7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC148Q8NFR7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18■□□□□ 0.47
CCDC148Q8NFR7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC148Q8NFR7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC148Q8NFR7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18■□□□□ 0.47
CCDC148Q8NFR7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC148Q8NFR7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18■□□□□ 0.47
CCDC148Q8NFR7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC148Q8NFR7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC148Q8NFR7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC148Q8NFR7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC148Q8NFR7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC148Q8NFR7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC148Q8NFR7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC148Q8NFR7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC148Q8NFR7 NME2-201ENST00000393183 568 ntTSL 2 BASIC18■□□□□ 0.47
CCDC148Q8NFR7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CCDC148Q8NFR7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CCDC148Q8NFR7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC148Q8NFR7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18■□□□□ 0.47
CCDC148Q8NFR7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC148Q8NFR7 AL391069.4-201ENST00000609583 481 ntBASIC18■□□□□ 0.47
CCDC148Q8NFR7 AC008761.3-201ENST00000624803 892 ntBASIC18■□□□□ 0.47
CCDC148Q8NFR7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18■□□□□ 0.47
CCDC148Q8NFR7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC148Q8NFR7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18■□□□□ 0.47
CCDC148Q8NFR7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC148Q8NFR7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC148Q8NFR7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC148Q8NFR7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18■□□□□ 0.47
CCDC148Q8NFR7 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC148Q8NFR7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC148Q8NFR7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC148Q8NFR7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC148Q8NFR7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 AC002472.2-201ENST00000442739 958 ntBASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 AC055876.2-201ENST00000531834 546 ntBASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 RARRES2P5-201ENST00000564013 466 ntBASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 AC036164.1-201ENST00000570544 333 ntBASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 RN7SL204P-201ENST00000582831 262 ntBASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 LINC02560-201ENST00000596379 459 ntBASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 AC000095.1-201ENST00000603208 874 ntBASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC148Q8NFR7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 DBET-201ENST00000630918 3363 ntBASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 MIR661-201ENST00000384842 89 ntBASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 AC236430.1-201ENST00000402231 743 ntBASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 RPL5P21-201ENST00000404620 815 ntBASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CCDC148Q8NFR7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms