Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 IGHV3-42-201ENST00000520410 361 ntBASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 AC020658.6-201ENST00000623564 1870 ntBASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SIMC1Q8NDZ2 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 AC127383.1-201ENST00000444697 1800 ntBASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 AC023908.3-201ENST00000564211 3047 ntBASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 AC044860.1-202ENST00000559481 777 ntBASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 SPCS2P1-201ENST00000561636 679 ntBASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 AC025048.3-201ENST00000590609 569 ntBASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 AC005702.4-201ENST00000618393 416 ntBASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIMC1Q8NDZ2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms