Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 FAM86GP-201ENST00000448322 971 ntBASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 AC027369.6-201ENST00000525520 931 ntBASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TTC9CQ8N5M4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 KRT18P28-201ENST00000453838 1332 ntBASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 RN7SL618P-201ENST00000477850 296 ntBASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 AC025048.3-201ENST00000590609 569 ntBASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 AL158211.3-201ENST00000607385 239 ntBASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 AC005702.4-201ENST00000618393 416 ntBASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 AC093028.1-201ENST00000622998 982 ntBASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.38□□□□□ -0.43
TTC9CQ8N5M4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms