Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC25Q86WR0 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CCDC25Q86WR0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC25Q86WR0 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC25Q86WR0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC25Q86WR0 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC25Q86WR0 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC25Q86WR0 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC25Q86WR0 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CCDC25Q86WR0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC25Q86WR0 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.21■□□□□ 0.18
CCDC25Q86WR0 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC25Q86WR0 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CCDC25Q86WR0 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC25Q86WR0 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC25Q86WR0 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
CCDC25Q86WR0 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC25Q86WR0 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 AC026396.1-201ENST00000419388 421 ntBASIC16.2■□□□□ 0.18
CCDC25Q86WR0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 SPTSSB-204ENST00000617024 1292 ntBASIC16.2■□□□□ 0.18
CCDC25Q86WR0 AL691432.3-201ENST00000621860 400 ntBASIC16.2■□□□□ 0.18
CCDC25Q86WR0 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CCDC25Q86WR0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 MROH4P-201ENST00000431302 1578 ntBASIC16.19■□□□□ 0.18
CCDC25Q86WR0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 AL645939.2-201ENST00000427340 991 ntBASIC16.19■□□□□ 0.18
CCDC25Q86WR0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 AC093909.1-201ENST00000504731 1122 ntBASIC16.19■□□□□ 0.18
CCDC25Q86WR0 KRT19P2-202ENST00000557173 1012 ntBASIC16.19■□□□□ 0.18
CCDC25Q86WR0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC25Q86WR0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms