Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 AL008707.1-201ENST00000422498 534 ntBASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 Z97180.1-201ENST00000445173 988 ntBASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 SPTLC1P5-201ENST00000450718 252 ntBASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 AC097724.1-201ENST00000609581 426 ntBASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 AC091544.8-201ENST00000619490 361 ntBASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LYSMD4Q5XG99 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 AC007787.1-201ENST00000588095 1583 ntBASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 KRT8P4-201ENST00000509735 1454 ntBASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 AL158070.2-201ENST00000623713 1621 ntBASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 RN7SL11P-201ENST00000471305 293 ntBASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 AC073413.1-201ENST00000603927 732 ntBASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 AC018695.7-201ENST00000624587 2492 ntBASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD4Q5XG99 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
LYSMD4Q5XG99 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.02
LYSMD4Q5XG99 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD4Q5XG99 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms