Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX3P78415 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX3P78415 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX3P78415 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX3P78415 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
IRX3P78415 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.22■□□□□ 0.51
IRX3P78415 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
IRX3P78415 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX3P78415 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
IRX3P78415 AL121723.1-201ENST00000445194 1519 ntBASIC18.22■□□□□ 0.51
IRX3P78415 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
IRX3P78415 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX3P78415 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX3P78415 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IRX3P78415 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.22■□□□□ 0.51
IRX3P78415 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
IRX3P78415 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.22■□□□□ 0.51
IRX3P78415 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX3P78415 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX3P78415 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
IRX3P78415 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX3P78415 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.21■□□□□ 0.51
IRX3P78415 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.21■□□□□ 0.51
IRX3P78415 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX3P78415 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX3P78415 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX3P78415 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX3P78415 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.21■□□□□ 0.51
IRX3P78415 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX3P78415 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IRX3P78415 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IRX3P78415 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.21■□□□□ 0.51
IRX3P78415 CICP4-201ENST00000447359 2812 ntBASIC18.21■□□□□ 0.51
IRX3P78415 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.21■□□□□ 0.51
IRX3P78415 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IRX3P78415 PFN1P12-201ENST00000455938 534 ntBASIC18.21■□□□□ 0.51
IRX3P78415 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX3P78415 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IRX3P78415 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.21■□□□□ 0.51
IRX3P78415 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.21■□□□□ 0.51
IRX3P78415 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IRX3P78415 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.21■□□□□ 0.51
IRX3P78415 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IRX3P78415 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.21■□□□□ 0.51
IRX3P78415 AC000095.1-201ENST00000603208 874 ntBASIC18.21■□□□□ 0.51
IRX3P78415 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX3P78415 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IRX3P78415 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX3P78415 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX3P78415 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IRX3P78415 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
IRX3P78415 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX3P78415 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX3P78415 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
IRX3P78415 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.21■□□□□ 0.51
IRX3P78415 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
IRX3P78415 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.21■□□□□ 0.51
IRX3P78415 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX3P78415 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
IRX3P78415 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IRX3P78415 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.2■□□□□ 0.5
IRX3P78415 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IRX3P78415 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.2■□□□□ 0.5
IRX3P78415 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.2■□□□□ 0.5
IRX3P78415 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
IRX3P78415 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
IRX3P78415 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.2■□□□□ 0.5
IRX3P78415 C2orf27AP3-201ENST00000434123 579 ntBASIC18.2■□□□□ 0.5
IRX3P78415 AC108725.1-201ENST00000495472 409 ntBASIC18.2■□□□□ 0.5
IRX3P78415 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IRX3P78415 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.2■□□□□ 0.5
IRX3P78415 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.2■□□□□ 0.5
IRX3P78415 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
IRX3P78415 AC244669.2-201ENST00000612320 853 ntBASIC18.2■□□□□ 0.5
IRX3P78415 AL354718.3-201ENST00000616414 581 ntBASIC18.2■□□□□ 0.5
IRX3P78415 CR382287.1-201ENST00000623954 586 ntBASIC18.2■□□□□ 0.5
IRX3P78415 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.2■□□□□ 0.5
IRX3P78415 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
IRX3P78415 AL607033.1-201ENST00000623900 1599 ntBASIC18.2■□□□□ 0.5
IRX3P78415 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IRX3P78415 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IRX3P78415 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IRX3P78415 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
IRX3P78415 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IRX3P78415 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IRX3P78415 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
IRX3P78415 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.2■□□□□ 0.5
IRX3P78415 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.2■□□□□ 0.5
IRX3P78415 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.2■□□□□ 0.5
IRX3P78415 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
IRX3P78415 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
IRX3P78415 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
IRX3P78415 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
IRX3P78415 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.19■□□□□ 0.5
IRX3P78415 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
IRX3P78415 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC18.19■□□□□ 0.5
IRX3P78415 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IRX3P78415 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
IRX3P78415 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.19■□□□□ 0.5
IRX3P78415 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms