Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 KRT17P3-201ENST00000420566 1262 ntBASIC11.74□□□□□ -0.53
HIST1H2BDP58876 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 BX088651.1-201ENST00000540551 451 ntBASIC11.74□□□□□ -0.53
HIST1H2BDP58876 AC008403.3-201ENST00000598924 454 ntBASIC11.74□□□□□ -0.53
HIST1H2BDP58876 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 KRT8P22-201ENST00000562317 1415 ntBASIC11.74□□□□□ -0.53
HIST1H2BDP58876 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 TP73-211ENST00000604074 4806 ntTSL 5 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 AC134407.2-201ENST00000625089 1978 ntBASIC11.74□□□□□ -0.53
HIST1H2BDP58876 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 AC134407.3-201ENST00000624035 2139 ntBASIC11.74□□□□□ -0.53
HIST1H2BDP58876 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 NPTN-IT1-201ENST00000628401 2283 ntBASIC11.74□□□□□ -0.53
HIST1H2BDP58876 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 FAM220CP-201ENST00000395253 831 ntBASIC11.73□□□□□ -0.53
HIST1H2BDP58876 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 TPT1P11-201ENST00000458482 498 ntBASIC11.73□□□□□ -0.53
HIST1H2BDP58876 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 AC092338.2-201ENST00000568827 1415 ntBASIC11.73□□□□□ -0.53
HIST1H2BDP58876 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 AF186192.3-201ENST00000583427 947 ntBASIC11.73□□□□□ -0.53
HIST1H2BDP58876 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC11.73□□□□□ -0.53
HIST1H2BDP58876 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 AC131212.3-201ENST00000624087 4219 ntBASIC11.72□□□□□ -0.53
HIST1H2BDP58876 AL022323.5-201ENST00000624101 2059 ntBASIC11.72□□□□□ -0.53
HIST1H2BDP58876 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms