Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CLRN1P58418 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLRN1P58418 BID-213ENST00000615414 2236 ntTSL 5 BASIC14□□□□□ -0.17
CLRN1P58418 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14□□□□□ -0.17
CLRN1P58418 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLRN1P58418 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CLRN1P58418 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14□□□□□ -0.17
CLRN1P58418 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLRN1P58418 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLRN1P58418 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14□□□□□ -0.17
CLRN1P58418 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14□□□□□ -0.17
CLRN1P58418 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CLRN1P58418 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLRN1P58418 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14□□□□□ -0.17
CLRN1P58418 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLRN1P58418 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14□□□□□ -0.17
CLRN1P58418 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLRN1P58418 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14□□□□□ -0.17
CLRN1P58418 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLRN1P58418 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.99□□□□□ -0.17
CLRN1P58418 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.99□□□□□ -0.17
CLRN1P58418 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.99□□□□□ -0.17
CLRN1P58418 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.99□□□□□ -0.17
CLRN1P58418 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CLRN1P58418 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.99□□□□□ -0.17
CLRN1P58418 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.99□□□□□ -0.17
CLRN1P58418 KRT18P28-201ENST00000453838 1332 ntBASIC13.99□□□□□ -0.17
CLRN1P58418 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.99□□□□□ -0.17
CLRN1P58418 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.99□□□□□ -0.17
CLRN1P58418 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CLRN1P58418 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.99□□□□□ -0.17
CLRN1P58418 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.99□□□□□ -0.17
CLRN1P58418 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.99□□□□□ -0.17
CLRN1P58418 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.99□□□□□ -0.17
CLRN1P58418 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.99□□□□□ -0.17
CLRN1P58418 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.99□□□□□ -0.17
CLRN1P58418 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.99□□□□□ -0.17
CLRN1P58418 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.99□□□□□ -0.17
CLRN1P58418 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.99□□□□□ -0.17
CLRN1P58418 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.99□□□□□ -0.17
CLRN1P58418 TEX28P1-201ENST00000613479 1221 ntBASIC13.99□□□□□ -0.17
CLRN1P58418 TEX28P2-201ENST00000617764 1221 ntBASIC13.99□□□□□ -0.17
CLRN1P58418 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.99□□□□□ -0.17
CLRN1P58418 AC144831.1-201ENST00000573312 2656 ntBASIC13.99□□□□□ -0.17
CLRN1P58418 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.99□□□□□ -0.17
CLRN1P58418 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CLRN1P58418 DBET-201ENST00000630918 3363 ntBASIC13.99□□□□□ -0.17
CLRN1P58418 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.99□□□□□ -0.17
CLRN1P58418 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.99□□□□□ -0.17
CLRN1P58418 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.99□□□□□ -0.17
CLRN1P58418 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CLRN1P58418 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CLRN1P58418 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.99□□□□□ -0.17
CLRN1P58418 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.99□□□□□ -0.17
CLRN1P58418 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.99□□□□□ -0.17
CLRN1P58418 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLRN1P58418 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
CLRN1P58418 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.99□□□□□ -0.17
CLRN1P58418 LINC00554-201ENST00000564841 3011 ntBASIC13.99□□□□□ -0.17
CLRN1P58418 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLRN1P58418 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLRN1P58418 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLRN1P58418 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CLRN1P58418 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.98□□□□□ -0.17
CLRN1P58418 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.98□□□□□ -0.17
CLRN1P58418 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLRN1P58418 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLRN1P58418 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLRN1P58418 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CLRN1P58418 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.98□□□□□ -0.17
CLRN1P58418 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms