Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHB4P54760 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
EPHB4P54760 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHB4P54760 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHB4P54760 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHB4P54760 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.58■□□□□ 0.4
EPHB4P54760 AC099063.4-201ENST00000641099 1602 ntBASIC17.58■□□□□ 0.4
EPHB4P54760 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHB4P54760 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB4P54760 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB4P54760 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB4P54760 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.57■□□□□ 0.4
EPHB4P54760 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB4P54760 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB4P54760 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB4P54760 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.57■□□□□ 0.4
EPHB4P54760 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.57■□□□□ 0.4
EPHB4P54760 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB4P54760 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB4P54760 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB4P54760 AL442647.2-201ENST00000429864 857 ntBASIC17.57■□□□□ 0.4
EPHB4P54760 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
EPHB4P54760 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.57■□□□□ 0.4
EPHB4P54760 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.57■□□□□ 0.4
EPHB4P54760 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.57■□□□□ 0.4
EPHB4P54760 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.57■□□□□ 0.4
EPHB4P54760 AL158212.4-201ENST00000624062 1286 ntBASIC17.57■□□□□ 0.4
EPHB4P54760 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
EPHB4P54760 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB4P54760 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.57■□□□□ 0.4
EPHB4P54760 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.57■□□□□ 0.4
EPHB4P54760 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB4P54760 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB4P54760 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB4P54760 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB4P54760 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB4P54760 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
EPHB4P54760 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB4P54760 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB4P54760 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB4P54760 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
EPHB4P54760 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB4P54760 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB4P54760 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB4P54760 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
EPHB4P54760 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB4P54760 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
EPHB4P54760 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
EPHB4P54760 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB4P54760 AL136982.4-201ENST00000437689 1740 ntBASIC17.56■□□□□ 0.4
EPHB4P54760 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB4P54760 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB4P54760 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB4P54760 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB4P54760 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.56■□□□□ 0.4
EPHB4P54760 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB4P54760 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.56■□□□□ 0.4
EPHB4P54760 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.56■□□□□ 0.4
EPHB4P54760 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.56■□□□□ 0.4
EPHB4P54760 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.56■□□□□ 0.4
EPHB4P54760 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.56■□□□□ 0.4
EPHB4P54760 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.56■□□□□ 0.4
EPHB4P54760 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.56■□□□□ 0.4
EPHB4P54760 RN7SL190P-201ENST00000582519 257 ntBASIC17.56■□□□□ 0.4
EPHB4P54760 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB4P54760 AL021578.1-201ENST00000613646 709 ntBASIC17.56■□□□□ 0.4
EPHB4P54760 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.56■□□□□ 0.4
EPHB4P54760 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB4P54760 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB4P54760 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
EPHB4P54760 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.56■□□□□ 0.4
EPHB4P54760 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
EPHB4P54760 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.56■□□□□ 0.4
EPHB4P54760 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
EPHB4P54760 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB4P54760 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB4P54760 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB4P54760 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB4P54760 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB4P54760 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB4P54760 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EPHB4P54760 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB4P54760 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
EPHB4P54760 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB4P54760 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB4P54760 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB4P54760 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB4P54760 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
EPHB4P54760 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.55■□□□□ 0.4
EPHB4P54760 AL512652.2-201ENST00000625156 1716 ntBASIC17.55■□□□□ 0.4
EPHB4P54760 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB4P54760 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB4P54760 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB4P54760 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB4P54760 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.55■□□□□ 0.4
EPHB4P54760 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB4P54760 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB4P54760 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.55■□□□□ 0.4
EPHB4P54760 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHB4P54760 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms