Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCN2P51788 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CLCN2P51788 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCN2P51788 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLCN2P51788 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.21■□□□□ 0.03
CLCN2P51788 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLCN2P51788 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.21■□□□□ 0.03
CLCN2P51788 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.21■□□□□ 0.03
CLCN2P51788 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.21■□□□□ 0.03
CLCN2P51788 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCN2P51788 AC018529.1-201ENST00000613063 361 ntBASIC15.21■□□□□ 0.03
CLCN2P51788 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLCN2P51788 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCN2P51788 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLCN2P51788 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CLCN2P51788 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCN2P51788 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCN2P51788 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCN2P51788 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCN2P51788 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCN2P51788 AC148477.4-201ENST00000613430 1793 ntBASIC15.21■□□□□ 0.02
CLCN2P51788 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLCN2P51788 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.21■□□□□ 0.02
CLCN2P51788 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLCN2P51788 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLCN2P51788 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLCN2P51788 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.2■□□□□ 0.02
CLCN2P51788 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN2P51788 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN2P51788 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN2P51788 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN2P51788 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CLCN2P51788 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN2P51788 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.2■□□□□ 0.02
CLCN2P51788 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN2P51788 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.2■□□□□ 0.02
CLCN2P51788 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN2P51788 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.2■□□□□ 0.02
CLCN2P51788 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.2■□□□□ 0.02
CLCN2P51788 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.2■□□□□ 0.02
CLCN2P51788 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN2P51788 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN2P51788 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN2P51788 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN2P51788 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN2P51788 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CLCN2P51788 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
CLCN2P51788 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.2■□□□□ 0.02
CLCN2P51788 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.2■□□□□ 0.02
CLCN2P51788 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.2■□□□□ 0.02
CLCN2P51788 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.2■□□□□ 0.02
CLCN2P51788 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.2■□□□□ 0.02
CLCN2P51788 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.2■□□□□ 0.02
CLCN2P51788 RNA5SP410-201ENST00000516285 106 ntBASIC15.2■□□□□ 0.02
CLCN2P51788 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.2■□□□□ 0.02
CLCN2P51788 AC024267.1-201ENST00000582320 895 ntBASIC15.2■□□□□ 0.02
CLCN2P51788 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN2P51788 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.2■□□□□ 0.02
CLCN2P51788 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
CLCN2P51788 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN2P51788 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.2■□□□□ 0.02
CLCN2P51788 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN2P51788 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLCN2P51788 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
CLCN2P51788 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN2P51788 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.2■□□□□ 0.02
CLCN2P51788 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN2P51788 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CLCN2P51788 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CLCN2P51788 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN2P51788 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN2P51788 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN2P51788 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN2P51788 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN2P51788 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLCN2P51788 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CLCN2P51788 NORAD-201ENST00000565493 5339 ntBASIC15.19■□□□□ 0.02
CLCN2P51788 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN2P51788 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CLCN2P51788 AC007686.3-201ENST00000619017 3487 ntBASIC15.19■□□□□ 0.02
CLCN2P51788 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN2P51788 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN2P51788 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN2P51788 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CLCN2P51788 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.19■□□□□ 0.02
CLCN2P51788 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN2P51788 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CLCN2P51788 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN2P51788 FGD5P1-202ENST00000614866 2498 ntBASIC15.19■□□□□ 0.02
CLCN2P51788 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.19■□□□□ 0.02
CLCN2P51788 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN2P51788 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN2P51788 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CLCN2P51788 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN2P51788 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN2P51788 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN2P51788 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.19■□□□□ 0.02
CLCN2P51788 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN2P51788 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CLCN2P51788 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms