Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
MMP13P45452 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.28■□□□□ 0.2
MMP13P45452 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.28■□□□□ 0.2
MMP13P45452 AC069120.2-201ENST00000524091 540 ntBASIC16.28■□□□□ 0.2
MMP13P45452 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP13P45452 AC140878.1-201ENST00000565277 250 ntBASIC16.28■□□□□ 0.2
MMP13P45452 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.28■□□□□ 0.2
MMP13P45452 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.28■□□□□ 0.2
MMP13P45452 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.28■□□□□ 0.2
MMP13P45452 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP13P45452 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP13P45452 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MMP13P45452 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP13P45452 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP13P45452 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MMP13P45452 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP13P45452 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP13P45452 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
MMP13P45452 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP13P45452 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP13P45452 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP13P45452 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
MMP13P45452 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MMP13P45452 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.27■□□□□ 0.2
MMP13P45452 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MMP13P45452 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
MMP13P45452 KRT8P12-202ENST00000472924 1397 ntBASIC16.27■□□□□ 0.2
MMP13P45452 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MMP13P45452 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.27■□□□□ 0.2
MMP13P45452 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.27■□□□□ 0.2
MMP13P45452 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.27■□□□□ 0.2
MMP13P45452 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MMP13P45452 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
MMP13P45452 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.27■□□□□ 0.2
MMP13P45452 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.27■□□□□ 0.2
MMP13P45452 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MMP13P45452 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MMP13P45452 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
MMP13P45452 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MMP13P45452 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MMP13P45452 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.27■□□□□ 0.2
MMP13P45452 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.27■□□□□ 0.2
MMP13P45452 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.27■□□□□ 0.2
MMP13P45452 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.27■□□□□ 0.2
MMP13P45452 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.27■□□□□ 0.2
MMP13P45452 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.27■□□□□ 0.2
MMP13P45452 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MMP13P45452 SPDYE12P-201ENST00000618416 771 ntBASIC16.27■□□□□ 0.2
MMP13P45452 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MMP13P45452 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.27■□□□□ 0.2
MMP13P45452 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
MMP13P45452 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
MMP13P45452 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
MMP13P45452 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MMP13P45452 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
MMP13P45452 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MMP13P45452 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MMP13P45452 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
MMP13P45452 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.27■□□□□ 0.19
MMP13P45452 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
MMP13P45452 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP13P45452 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP13P45452 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP13P45452 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP13P45452 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.26■□□□□ 0.19
MMP13P45452 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MMP13P45452 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP13P45452 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP13P45452 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP13P45452 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MMP13P45452 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MMP13P45452 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.26■□□□□ 0.19
MMP13P45452 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.26■□□□□ 0.19
MMP13P45452 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MMP13P45452 AL080243.2-201ENST00000418783 582 ntBASIC16.26■□□□□ 0.19
MMP13P45452 PMS2P2-201ENST00000425039 1128 ntBASIC16.26■□□□□ 0.19
MMP13P45452 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MMP13P45452 HLA-V-204ENST00000476601 1289 ntBASIC16.26■□□□□ 0.19
MMP13P45452 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP13P45452 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.26■□□□□ 0.19
MMP13P45452 AC073592.8-201ENST00000624126 511 ntBASIC16.26■□□□□ 0.19
MMP13P45452 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MMP13P45452 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
MMP13P45452 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
MMP13P45452 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.26■□□□□ 0.19
MMP13P45452 AC139749.1-202ENST00000617529 3139 ntBASIC16.26■□□□□ 0.19
MMP13P45452 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
MMP13P45452 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP13P45452 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP13P45452 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.26■□□□□ 0.19
MMP13P45452 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP13P45452 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MMP13P45452 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP13P45452 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP13P45452 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
MMP13P45452 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP13P45452 KRT8P44-201ENST00000441609 1350 ntBASIC16.26■□□□□ 0.19
MMP13P45452 FO538757.1-201ENST00000623083 1397 ntBASIC16.26■□□□□ 0.19
MMP13P45452 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
MMP13P45452 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms