Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HADHAP40939 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HADHAP40939 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.85■□□□□ 0.13
HADHAP40939 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
HADHAP40939 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HADHAP40939 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HADHAP40939 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HADHAP40939 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HADHAP40939 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.85■□□□□ 0.13
HADHAP40939 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.85■□□□□ 0.13
HADHAP40939 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
HADHAP40939 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.85■□□□□ 0.13
HADHAP40939 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.85■□□□□ 0.13
HADHAP40939 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HADHAP40939 AC097359.3-201ENST00000603982 1210 ntBASIC15.85■□□□□ 0.13
HADHAP40939 TEX28P1-201ENST00000613479 1221 ntBASIC15.85■□□□□ 0.13
HADHAP40939 AL138828.2-201ENST00000615812 383 ntBASIC15.85■□□□□ 0.13
HADHAP40939 TEX28P2-201ENST00000617764 1221 ntBASIC15.85■□□□□ 0.13
HADHAP40939 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
HADHAP40939 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HADHAP40939 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HADHAP40939 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HADHAP40939 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.85■□□□□ 0.13
HADHAP40939 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HADHAP40939 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HADHAP40939 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HADHAP40939 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
HADHAP40939 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HADHAP40939 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.85■□□□□ 0.13
HADHAP40939 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.85■□□□□ 0.13
HADHAP40939 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HADHAP40939 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HADHAP40939 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HADHAP40939 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
HADHAP40939 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
HADHAP40939 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HADHAP40939 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.85■□□□□ 0.13
HADHAP40939 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
HADHAP40939 C18orf15-201ENST00000623680 2534 ntBASIC15.85■□□□□ 0.13
HADHAP40939 AC127383.1-201ENST00000444697 1800 ntBASIC15.84■□□□□ 0.13
HADHAP40939 AC023824.1-201ENST00000562945 2975 ntBASIC15.84■□□□□ 0.13
HADHAP40939 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HADHAP40939 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HADHAP40939 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HADHAP40939 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HADHAP40939 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HADHAP40939 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
HADHAP40939 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HADHAP40939 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HADHAP40939 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
HADHAP40939 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
HADHAP40939 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HADHAP40939 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.84■□□□□ 0.13
HADHAP40939 AC027369.6-201ENST00000525520 931 ntBASIC15.84■□□□□ 0.13
HADHAP40939 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.84■□□□□ 0.13
HADHAP40939 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.84■□□□□ 0.13
HADHAP40939 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HADHAP40939 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
HADHAP40939 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.84■□□□□ 0.13
HADHAP40939 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.84■□□□□ 0.13
HADHAP40939 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.84■□□□□ 0.13
HADHAP40939 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.84■□□□□ 0.13
HADHAP40939 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.84■□□□□ 0.13
HADHAP40939 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
HADHAP40939 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HADHAP40939 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.84■□□□□ 0.13
HADHAP40939 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HADHAP40939 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HADHAP40939 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.84■□□□□ 0.13
HADHAP40939 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.84■□□□□ 0.13
HADHAP40939 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.84■□□□□ 0.13
HADHAP40939 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HADHAP40939 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.84■□□□□ 0.13
HADHAP40939 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HADHAP40939 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HADHAP40939 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HADHAP40939 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HADHAP40939 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
HADHAP40939 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HADHAP40939 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HADHAP40939 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
HADHAP40939 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.84■□□□□ 0.13
HADHAP40939 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HADHAP40939 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HADHAP40939 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HADHAP40939 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
HADHAP40939 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.83■□□□□ 0.13
HADHAP40939 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HADHAP40939 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
HADHAP40939 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HADHAP40939 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.83■□□□□ 0.13
HADHAP40939 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.83■□□□□ 0.12
HADHAP40939 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HADHAP40939 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HADHAP40939 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.83■□□□□ 0.12
HADHAP40939 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HADHAP40939 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HADHAP40939 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HADHAP40939 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
HADHAP40939 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms