Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.45
CLCN1P35523 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLCN1P35523 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLCN1P35523 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLCN1P35523 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC17.83■□□□□ 0.45
CLCN1P35523 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLCN1P35523 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.83■□□□□ 0.45
CLCN1P35523 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN1P35523 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN1P35523 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.83■□□□□ 0.44
CLCN1P35523 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN1P35523 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.83■□□□□ 0.44
CLCN1P35523 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.83■□□□□ 0.44
CLCN1P35523 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN1P35523 FDX1P1-201ENST00000449115 551 ntBASIC17.83■□□□□ 0.44
CLCN1P35523 HCG4B-203ENST00000450128 991 ntBASIC17.83■□□□□ 0.44
CLCN1P35523 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.83■□□□□ 0.44
CLCN1P35523 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.83■□□□□ 0.44
CLCN1P35523 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN1P35523 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.83■□□□□ 0.44
CLCN1P35523 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.83■□□□□ 0.44
CLCN1P35523 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.83■□□□□ 0.44
CLCN1P35523 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN1P35523 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.83■□□□□ 0.44
CLCN1P35523 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.83■□□□□ 0.44
CLCN1P35523 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN1P35523 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
CLCN1P35523 AL591122.2-201ENST00000624125 1853 ntBASIC17.83■□□□□ 0.44
CLCN1P35523 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC17.83■□□□□ 0.44
CLCN1P35523 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN1P35523 C2-206ENST00000442278 2434 ntTSL 2 BASIC17.83■□□□□ 0.44
CLCN1P35523 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CLCN1P35523 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
CLCN1P35523 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CLCN1P35523 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.83■□□□□ 0.44
CLCN1P35523 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.83■□□□□ 0.44
CLCN1P35523 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN1P35523 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.83■□□□□ 0.44
CLCN1P35523 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN1P35523 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.83■□□□□ 0.44
CLCN1P35523 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCN1P35523 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
CLCN1P35523 AL592424.1-201ENST00000563624 1536 ntBASIC17.82■□□□□ 0.44
CLCN1P35523 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN1P35523 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.82■□□□□ 0.44
CLCN1P35523 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN1P35523 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN1P35523 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.82■□□□□ 0.44
CLCN1P35523 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN1P35523 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN1P35523 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN1P35523 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN1P35523 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN1P35523 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.82■□□□□ 0.44
CLCN1P35523 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.82■□□□□ 0.44
CLCN1P35523 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC17.82■□□□□ 0.44
CLCN1P35523 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN1P35523 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
CLCN1P35523 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN1P35523 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CLCN1P35523 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN1P35523 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.82■□□□□ 0.44
CLCN1P35523 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN1P35523 HMGA1P7-201ENST00000406908 502 ntBASIC17.82■□□□□ 0.44
CLCN1P35523 CRYGEP-201ENST00000412192 528 ntBASIC17.82■□□□□ 0.44
CLCN1P35523 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.82■□□□□ 0.44
CLCN1P35523 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.82■□□□□ 0.44
CLCN1P35523 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CLCN1P35523 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN1P35523 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN1P35523 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CLCN1P35523 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.82■□□□□ 0.44
CLCN1P35523 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.82■□□□□ 0.44
CLCN1P35523 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.82■□□□□ 0.44
CLCN1P35523 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN1P35523 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN1P35523 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC17.82■□□□□ 0.44
CLCN1P35523 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN1P35523 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN1P35523 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN1P35523 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CLCN1P35523 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CLCN1P35523 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCN1P35523 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN1P35523 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLCN1P35523 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN1P35523 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC17.81■□□□□ 0.44
CLCN1P35523 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN1P35523 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN1P35523 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.81■□□□□ 0.44
CLCN1P35523 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN1P35523 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN1P35523 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCN1P35523 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN1P35523 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN1P35523 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCN1P35523 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLCN1P35523 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN1P35523 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCN1P35523 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms