Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.63□□□□□ -0.23
ACKR3P25106 AC134684.3-201ENST00000641758 218 ntBASIC13.63□□□□□ -0.23
ACKR3P25106 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.63□□□□□ -0.23
ACKR3P25106 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.63□□□□□ -0.23
ACKR3P25106 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ACKR3P25106 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ACKR3P25106 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ACKR3P25106 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ACKR3P25106 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ACKR3P25106 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ACKR3P25106 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.63□□□□□ -0.23
ACKR3P25106 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.63□□□□□ -0.23
ACKR3P25106 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ACKR3P25106 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.63□□□□□ -0.23
ACKR3P25106 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ACKR3P25106 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ACKR3P25106 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ACKR3P25106 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.63□□□□□ -0.23
ACKR3P25106 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
ACKR3P25106 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
ACKR3P25106 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
ACKR3P25106 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ACKR3P25106 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.62□□□□□ -0.23
ACKR3P25106 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.62□□□□□ -0.23
ACKR3P25106 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.62□□□□□ -0.23
ACKR3P25106 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ACKR3P25106 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.62□□□□□ -0.23
ACKR3P25106 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.62□□□□□ -0.23
ACKR3P25106 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.62□□□□□ -0.23
ACKR3P25106 MTND6P24-201ENST00000440466 518 ntBASIC13.62□□□□□ -0.23
ACKR3P25106 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.62□□□□□ -0.23
ACKR3P25106 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.62□□□□□ -0.23
ACKR3P25106 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.62□□□□□ -0.23
ACKR3P25106 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
ACKR3P25106 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.62□□□□□ -0.23
ACKR3P25106 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.62□□□□□ -0.23
ACKR3P25106 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.62□□□□□ -0.23
ACKR3P25106 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ACKR3P25106 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ACKR3P25106 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ACKR3P25106 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ACKR3P25106 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.62□□□□□ -0.23
ACKR3P25106 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.62□□□□□ -0.23
ACKR3P25106 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
ACKR3P25106 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ACKR3P25106 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ACKR3P25106 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.61□□□□□ -0.23
ACKR3P25106 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.61□□□□□ -0.23
ACKR3P25106 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ACKR3P25106 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ACKR3P25106 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
ACKR3P25106 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ACKR3P25106 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ACKR3P25106 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ACKR3P25106 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ACKR3P25106 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
ACKR3P25106 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.61□□□□□ -0.23
ACKR3P25106 AL035456.1-201ENST00000456064 1369 ntBASIC13.61□□□□□ -0.23
ACKR3P25106 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.61□□□□□ -0.23
ACKR3P25106 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.61□□□□□ -0.23
ACKR3P25106 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ACKR3P25106 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.61□□□□□ -0.23
ACKR3P25106 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ACKR3P25106 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ACKR3P25106 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.61□□□□□ -0.23
ACKR3P25106 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
ACKR3P25106 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ACKR3P25106 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ACKR3P25106 CICP14-201ENST00000629111 2732 ntBASIC13.61□□□□□ -0.23
ACKR3P25106 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ACKR3P25106 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ACKR3P25106 AC091951.1-201ENST00000512854 2465 ntBASIC13.61□□□□□ -0.23
ACKR3P25106 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.61□□□□□ -0.23
ACKR3P25106 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ACKR3P25106 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ACKR3P25106 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ACKR3P25106 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms