Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCND1P24385 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.82■□□□□ 0.12
CCND1P24385 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.81■□□□□ 0.12
CCND1P24385 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.81■□□□□ 0.12
CCND1P24385 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCND1P24385 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCND1P24385 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.81■□□□□ 0.12
CCND1P24385 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.81■□□□□ 0.12
CCND1P24385 AP003680.1-201ENST00000598970 3660 ntBASIC15.81■□□□□ 0.12
CCND1P24385 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CCND1P24385 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCND1P24385 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CCND1P24385 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCND1P24385 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.81■□□□□ 0.12
CCND1P24385 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.81■□□□□ 0.12
CCND1P24385 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCND1P24385 RPSAP43-201ENST00000402237 625 ntBASIC15.81■□□□□ 0.12
CCND1P24385 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.81■□□□□ 0.12
CCND1P24385 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.81■□□□□ 0.12
CCND1P24385 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.81■□□□□ 0.12
CCND1P24385 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.81■□□□□ 0.12
CCND1P24385 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCND1P24385 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.81■□□□□ 0.12
CCND1P24385 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.81■□□□□ 0.12
CCND1P24385 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCND1P24385 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCND1P24385 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCND1P24385 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.81■□□□□ 0.12
CCND1P24385 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.81■□□□□ 0.12
CCND1P24385 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.81■□□□□ 0.12
CCND1P24385 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.81■□□□□ 0.12
CCND1P24385 AGAP7P-201ENST00000582299 2062 ntBASIC15.81■□□□□ 0.12
CCND1P24385 AC024267.1-201ENST00000582320 895 ntBASIC15.81■□□□□ 0.12
CCND1P24385 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCND1P24385 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.81■□□□□ 0.12
CCND1P24385 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.81■□□□□ 0.12
CCND1P24385 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CCND1P24385 SPTSSB-204ENST00000617024 1292 ntBASIC15.81■□□□□ 0.12
CCND1P24385 AGAP14-201ENST00000624701 2060 ntBASIC15.81■□□□□ 0.12
CCND1P24385 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.81■□□□□ 0.12
CCND1P24385 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CCND1P24385 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCND1P24385 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCND1P24385 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCND1P24385 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCND1P24385 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCND1P24385 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.81■□□□□ 0.12
CCND1P24385 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCND1P24385 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.8■□□□□ 0.12
CCND1P24385 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CCND1P24385 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.8■□□□□ 0.12
CCND1P24385 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.8■□□□□ 0.12
CCND1P24385 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.8■□□□□ 0.12
CCND1P24385 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.8■□□□□ 0.12
CCND1P24385 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.8■□□□□ 0.12
CCND1P24385 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.8■□□□□ 0.12
CCND1P24385 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CCND1P24385 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.8■□□□□ 0.12
CCND1P24385 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.8■□□□□ 0.12
CCND1P24385 SPCS2P4-201ENST00000436160 681 ntBASIC15.8■□□□□ 0.12
CCND1P24385 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.8■□□□□ 0.12
CCND1P24385 KRT8P48-201ENST00000515599 1220 ntBASIC15.8■□□□□ 0.12
CCND1P24385 AC092865.5-201ENST00000545435 363 ntBASIC15.8■□□□□ 0.12
CCND1P24385 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.8■□□□□ 0.12
CCND1P24385 MIR4469-201ENST00000583919 79 ntBASIC15.8■□□□□ 0.12
CCND1P24385 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.8■□□□□ 0.12
CCND1P24385 AC010327.4-202ENST00000591484 748 ntBASIC15.8■□□□□ 0.12
CCND1P24385 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
CCND1P24385 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.8■□□□□ 0.12
CCND1P24385 FGD5P1-202ENST00000614866 2498 ntBASIC15.8■□□□□ 0.12
CCND1P24385 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.8■□□□□ 0.12
CCND1P24385 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.8■□□□□ 0.12
CCND1P24385 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CCND1P24385 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.8■□□□□ 0.12
CCND1P24385 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCND1P24385 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms