Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCLP19338 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NCLP19338 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCLP19338 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC18.71■□□□□ 0.58
NCLP19338 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NCLP19338 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.7■□□□□ 0.58
NCLP19338 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCLP19338 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCLP19338 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NCLP19338 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCLP19338 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
NCLP19338 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCLP19338 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
NCLP19338 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC18.7■□□□□ 0.58
NCLP19338 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NCLP19338 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NCLP19338 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCLP19338 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCLP19338 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCLP19338 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NCLP19338 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCLP19338 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NCLP19338 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCLP19338 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCLP19338 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCLP19338 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCLP19338 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
NCLP19338 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.7■□□□□ 0.58
NCLP19338 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.7■□□□□ 0.58
NCLP19338 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.7■□□□□ 0.58
NCLP19338 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NCLP19338 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
NCLP19338 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NCLP19338 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.7■□□□□ 0.58
NCLP19338 MIR3909-201ENST00000579518 119 ntBASIC18.7■□□□□ 0.58
NCLP19338 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.7■□□□□ 0.58
NCLP19338 AL359258.3-201ENST00000622910 2331 ntBASIC18.7■□□□□ 0.58
NCLP19338 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NCLP19338 AC090616.6-203ENST00000579186 1945 ntBASIC18.7■□□□□ 0.58
NCLP19338 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCLP19338 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.7■□□□□ 0.58
NCLP19338 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NCLP19338 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCLP19338 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.7■□□□□ 0.58
NCLP19338 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCLP19338 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC18.7■□□□□ 0.58
NCLP19338 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
NCLP19338 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCLP19338 USP28-214ENST00000545540 3431 ntTSL 2 BASIC18.7■□□□□ 0.58
NCLP19338 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.69■□□□□ 0.58
NCLP19338 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC18.69■□□□□ 0.58
NCLP19338 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCLP19338 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCLP19338 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC18.69■□□□□ 0.58
NCLP19338 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NCLP19338 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NCLP19338 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.69■□□□□ 0.58
NCLP19338 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
NCLP19338 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCLP19338 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCLP19338 AC004967.1-201ENST00000453589 447 ntBASIC18.69■□□□□ 0.58
NCLP19338 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.69■□□□□ 0.58
NCLP19338 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.69■□□□□ 0.58
NCLP19338 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
NCLP19338 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.69■□□□□ 0.58
NCLP19338 AC004877.2-201ENST00000623941 599 ntBASIC18.69■□□□□ 0.58
NCLP19338 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCLP19338 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC18.69■□□□□ 0.58
NCLP19338 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC18.69■□□□□ 0.58
NCLP19338 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCLP19338 AC117489.1-201ENST00000625169 3217 ntBASIC18.69■□□□□ 0.58
NCLP19338 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCLP19338 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.69■□□□□ 0.58
NCLP19338 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCLP19338 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCLP19338 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCLP19338 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCLP19338 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCLP19338 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NCLP19338 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCLP19338 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCLP19338 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NCLP19338 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC18.68■□□□□ 0.58
NCLP19338 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.68■□□□□ 0.58
NCLP19338 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCLP19338 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCLP19338 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCLP19338 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCLP19338 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCLP19338 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NCLP19338 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCLP19338 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC18.68■□□□□ 0.58
NCLP19338 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
NCLP19338 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
NCLP19338 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NCLP19338 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.68■□□□□ 0.58
NCLP19338 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.68■□□□□ 0.58
NCLP19338 KRT18P34-201ENST00000488218 1270 ntBASIC18.68■□□□□ 0.58
NCLP19338 YBX1P5-201ENST00000509441 847 ntBASIC18.68■□□□□ 0.58
NCLP19338 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms