Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.53■□□□□ 0.08
NELFEP18615 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.53■□□□□ 0.08
NELFEP18615 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.53■□□□□ 0.08
NELFEP18615 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NELFEP18615 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NELFEP18615 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.53■□□□□ 0.08
NELFEP18615 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
NELFEP18615 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NELFEP18615 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.53■□□□□ 0.08
NELFEP18615 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NELFEP18615 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NELFEP18615 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NELFEP18615 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
NELFEP18615 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.53■□□□□ 0.08
NELFEP18615 TCAF2P1-201ENST00000291129 2421 ntBASIC15.53■□□□□ 0.08
NELFEP18615 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NELFEP18615 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NELFEP18615 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NELFEP18615 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NELFEP18615 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
NELFEP18615 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NELFEP18615 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NELFEP18615 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NELFEP18615 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NELFEP18615 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NELFEP18615 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.52■□□□□ 0.08
NELFEP18615 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NELFEP18615 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NELFEP18615 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NELFEP18615 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.52■□□□□ 0.08
NELFEP18615 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NELFEP18615 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NELFEP18615 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.52■□□□□ 0.08
NELFEP18615 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.52■□□□□ 0.08
NELFEP18615 ZNF890P-202ENST00000530367 1156 ntBASIC15.52■□□□□ 0.08
NELFEP18615 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NELFEP18615 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.52■□□□□ 0.08
NELFEP18615 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.52■□□□□ 0.08
NELFEP18615 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
NELFEP18615 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.52■□□□□ 0.08
NELFEP18615 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.52■□□□□ 0.08
NELFEP18615 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.52■□□□□ 0.08
NELFEP18615 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.08
NELFEP18615 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NELFEP18615 AF228730.6-201ENST00000641497 218 ntBASIC15.52■□□□□ 0.08
NELFEP18615 AC084121.3-201ENST00000641716 218 ntBASIC15.52■□□□□ 0.08
NELFEP18615 AC105233.6-201ENST00000642093 218 ntBASIC15.52■□□□□ 0.08
NELFEP18615 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NELFEP18615 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NELFEP18615 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NELFEP18615 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NELFEP18615 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NELFEP18615 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
NELFEP18615 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NELFEP18615 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NELFEP18615 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NELFEP18615 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
NELFEP18615 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
NELFEP18615 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NELFEP18615 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
NELFEP18615 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NELFEP18615 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFEP18615 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.51■□□□□ 0.07
NELFEP18615 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFEP18615 AL359258.3-201ENST00000622910 2331 ntBASIC15.51■□□□□ 0.07
NELFEP18615 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFEP18615 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFEP18615 KRT8P12-202ENST00000472924 1397 ntBASIC15.51■□□□□ 0.07
NELFEP18615 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NELFEP18615 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.51■□□□□ 0.07
NELFEP18615 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFEP18615 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFEP18615 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFEP18615 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFEP18615 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NELFEP18615 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NELFEP18615 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.51■□□□□ 0.07
NELFEP18615 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFEP18615 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFEP18615 PIN1P1-201ENST00000412108 996 ntBASIC15.51■□□□□ 0.07
NELFEP18615 SPDYE17-201ENST00000412399 783 ntBASIC15.51■□□□□ 0.07
NELFEP18615 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.51■□□□□ 0.07
NELFEP18615 SPTLC1P1-201ENST00000447199 261 ntBASIC15.51■□□□□ 0.07
NELFEP18615 AL139010.1-201ENST00000454878 894 ntBASIC15.51■□□□□ 0.07
NELFEP18615 SERBP1P3-201ENST00000459980 809 ntBASIC15.51■□□□□ 0.07
NELFEP18615 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFEP18615 POU5F1P6-201ENST00000466990 990 ntBASIC15.51■□□□□ 0.07
NELFEP18615 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NELFEP18615 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.51■□□□□ 0.07
NELFEP18615 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFEP18615 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.51■□□□□ 0.07
NELFEP18615 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.51■□□□□ 0.07
NELFEP18615 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.51■□□□□ 0.07
NELFEP18615 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.51■□□□□ 0.07
NELFEP18615 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFEP18615 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.51■□□□□ 0.07
NELFEP18615 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.51■□□□□ 0.07
NELFEP18615 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
NELFEP18615 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NELFEP18615 AC008738.7-201ENST00000609744 511 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms