Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLUP10909 AC126365.1-201ENST00000578585 1514 ntBASIC14.15□□□□□ -0.14
CLUP10909 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLUP10909 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CLUP10909 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.15□□□□□ -0.14
CLUP10909 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.15□□□□□ -0.14
CLUP10909 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLUP10909 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLUP10909 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLUP10909 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLUP10909 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLUP10909 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLUP10909 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.15□□□□□ -0.14
CLUP10909 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLUP10909 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLUP10909 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLUP10909 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLUP10909 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLUP10909 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLUP10909 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.15□□□□□ -0.14
CLUP10909 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLUP10909 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.15□□□□□ -0.14
CLUP10909 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.15□□□□□ -0.14
CLUP10909 AL591424.1-201ENST00000442569 1213 ntBASIC14.15□□□□□ -0.14
CLUP10909 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.15□□□□□ -0.14
CLUP10909 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
CLUP10909 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.15□□□□□ -0.14
CLUP10909 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CLUP10909 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.15□□□□□ -0.14
CLUP10909 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.15□□□□□ -0.14
CLUP10909 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.15□□□□□ -0.14
CLUP10909 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.15□□□□□ -0.14
CLUP10909 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
CLUP10909 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CLUP10909 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLUP10909 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLUP10909 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLUP10909 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CLUP10909 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLUP10909 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.15□□□□□ -0.14
CLUP10909 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLUP10909 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLUP10909 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CLUP10909 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLUP10909 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLUP10909 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.15□□□□□ -0.14
CLUP10909 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.15□□□□□ -0.14
CLUP10909 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLUP10909 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.15□□□□□ -0.14
CLUP10909 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CLUP10909 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.15□□□□□ -0.14
CLUP10909 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
CLUP10909 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLUP10909 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLUP10909 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLUP10909 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLUP10909 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.14□□□□□ -0.15
CLUP10909 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CLUP10909 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CLUP10909 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CLUP10909 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLUP10909 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLUP10909 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLUP10909 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLUP10909 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLUP10909 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
CLUP10909 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLUP10909 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLUP10909 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLUP10909 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLUP10909 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.14□□□□□ -0.15
CLUP10909 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLUP10909 MIR346-201ENST00000362234 95 ntBASIC14.14□□□□□ -0.15
CLUP10909 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLUP10909 FDX1P1-201ENST00000449115 551 ntBASIC14.14□□□□□ -0.15
CLUP10909 PHKG1P2-201ENST00000457537 863 ntBASIC14.14□□□□□ -0.15
CLUP10909 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.14□□□□□ -0.15
CLUP10909 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.14□□□□□ -0.15
CLUP10909 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.14□□□□□ -0.15
CLUP10909 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.14□□□□□ -0.15
CLUP10909 LINC01225-203ENST00000563550 1244 ntBASIC14.14□□□□□ -0.15
CLUP10909 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.14□□□□□ -0.15
CLUP10909 AL121894.2-201ENST00000602977 491 ntBASIC14.14□□□□□ -0.15
CLUP10909 FAM197Y3-203ENST00000618346 717 ntBASIC14.14□□□□□ -0.15
CLUP10909 AC138969.2-201ENST00000532739 9932 ntBASIC14.14□□□□□ -0.15
CLUP10909 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLUP10909 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
CLUP10909 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CLUP10909 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.14□□□□□ -0.15
CLUP10909 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CLUP10909 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLUP10909 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.14□□□□□ -0.15
CLUP10909 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CLUP10909 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLUP10909 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLUP10909 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CLUP10909 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLUP10909 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLUP10909 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CLUP10909 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms