Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FREM3P0C091 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FREM3P0C091 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.16□□□□□ -0.14
FREM3P0C091 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FREM3P0C091 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FREM3P0C091 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
FREM3P0C091 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.16□□□□□ -0.14
FREM3P0C091 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
FREM3P0C091 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
FREM3P0C091 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.16□□□□□ -0.14
FREM3P0C091 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FREM3P0C091 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.16□□□□□ -0.14
FREM3P0C091 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FREM3P0C091 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FREM3P0C091 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.15□□□□□ -0.14
FREM3P0C091 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
FREM3P0C091 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
FREM3P0C091 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FREM3P0C091 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FREM3P0C091 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
FREM3P0C091 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.15□□□□□ -0.14
FREM3P0C091 KRT18P43-201ENST00000469825 1281 ntBASIC14.15□□□□□ -0.14
FREM3P0C091 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.15□□□□□ -0.14
FREM3P0C091 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
FREM3P0C091 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
FREM3P0C091 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.15□□□□□ -0.14
FREM3P0C091 AC112693.3-201ENST00000624819 1983 ntBASIC14.15□□□□□ -0.14
FREM3P0C091 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
FREM3P0C091 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.15□□□□□ -0.14
FREM3P0C091 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
FREM3P0C091 AC022532.1-201ENST00000624563 1728 ntBASIC14.15□□□□□ -0.14
FREM3P0C091 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
FREM3P0C091 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FREM3P0C091 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.15□□□□□ -0.14
FREM3P0C091 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FREM3P0C091 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
FREM3P0C091 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
FREM3P0C091 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
FREM3P0C091 AC007541.1-201ENST00000570282 1469 ntBASIC14.15□□□□□ -0.14
FREM3P0C091 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FREM3P0C091 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.15□□□□□ -0.14
FREM3P0C091 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.15□□□□□ -0.14
FREM3P0C091 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
FREM3P0C091 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FREM3P0C091 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.15□□□□□ -0.14
FREM3P0C091 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.15□□□□□ -0.14
FREM3P0C091 AC087499.6-201ENST00000411576 835 ntBASIC14.15□□□□□ -0.14
FREM3P0C091 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.15□□□□□ -0.14
FREM3P0C091 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FREM3P0C091 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.15□□□□□ -0.14
FREM3P0C091 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.15□□□□□ -0.14
FREM3P0C091 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.15□□□□□ -0.14
FREM3P0C091 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.15□□□□□ -0.14
FREM3P0C091 AC120045.2-201ENST00000567334 178 ntBASIC14.15□□□□□ -0.14
FREM3P0C091 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.15□□□□□ -0.14
FREM3P0C091 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
FREM3P0C091 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.15□□□□□ -0.14
FREM3P0C091 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FREM3P0C091 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.15□□□□□ -0.14
FREM3P0C091 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FREM3P0C091 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
FREM3P0C091 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.15□□□□□ -0.14
FREM3P0C091 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.15□□□□□ -0.14
FREM3P0C091 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FREM3P0C091 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.15□□□□□ -0.14
FREM3P0C091 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
FREM3P0C091 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.14□□□□□ -0.15
FREM3P0C091 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FREM3P0C091 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FREM3P0C091 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
FREM3P0C091 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FREM3P0C091 RNU1-114P-201ENST00000365297 166 ntBASIC14.14□□□□□ -0.15
FREM3P0C091 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
FREM3P0C091 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.14□□□□□ -0.15
FREM3P0C091 MEP1AP4-201ENST00000423244 1087 ntBASIC14.14□□□□□ -0.15
FREM3P0C091 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.14□□□□□ -0.15
FREM3P0C091 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.14□□□□□ -0.15
FREM3P0C091 RPL13AP25-201ENST00000484130 612 ntBASIC14.14□□□□□ -0.15
FREM3P0C091 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.14□□□□□ -0.15
FREM3P0C091 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.14□□□□□ -0.15
FREM3P0C091 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FREM3P0C091 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.14□□□□□ -0.15
FREM3P0C091 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
FREM3P0C091 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
FREM3P0C091 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.14□□□□□ -0.15
FREM3P0C091 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
FREM3P0C091 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.14□□□□□ -0.15
FREM3P0C091 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
FREM3P0C091 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.14□□□□□ -0.15
FREM3P0C091 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
FREM3P0C091 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FREM3P0C091 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
FREM3P0C091 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FREM3P0C091 AC011477.6-201ENST00000604980 1927 ntBASIC14.14□□□□□ -0.15
FREM3P0C091 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
FREM3P0C091 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.14□□□□□ -0.15
FREM3P0C091 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
FREM3P0C091 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
FREM3P0C091 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
FREM3P0C091 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms