Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHGBP05060 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHGBP05060 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.66■□□□□ 0.58
CHGBP05060 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.66■□□□□ 0.58
CHGBP05060 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CHGBP05060 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHGBP05060 C1QBPP1-201ENST00000400117 770 ntBASIC18.66■□□□□ 0.58
CHGBP05060 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
CHGBP05060 AC134915.1-201ENST00000426461 574 ntBASIC18.66■□□□□ 0.58
CHGBP05060 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHGBP05060 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.66■□□□□ 0.58
CHGBP05060 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CHGBP05060 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.66■□□□□ 0.58
CHGBP05060 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.66■□□□□ 0.58
CHGBP05060 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.66■□□□□ 0.58
CHGBP05060 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHGBP05060 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.66■□□□□ 0.58
CHGBP05060 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.66■□□□□ 0.58
CHGBP05060 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHGBP05060 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHGBP05060 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CHGBP05060 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.66■□□□□ 0.58
CHGBP05060 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHGBP05060 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHGBP05060 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CHGBP05060 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHGBP05060 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.66■□□□□ 0.58
CHGBP05060 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHGBP05060 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.66■□□□□ 0.58
CHGBP05060 KRT8P22-201ENST00000562317 1415 ntBASIC18.66■□□□□ 0.58
CHGBP05060 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHGBP05060 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CHGBP05060 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHGBP05060 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.65■□□□□ 0.58
CHGBP05060 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHGBP05060 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHGBP05060 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.65■□□□□ 0.58
CHGBP05060 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHGBP05060 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHGBP05060 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHGBP05060 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHGBP05060 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CHGBP05060 AC023024.2-201ENST00000623561 1993 ntBASIC18.65■□□□□ 0.58
CHGBP05060 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.65■□□□□ 0.58
CHGBP05060 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHGBP05060 U91328.1-201ENST00000437528 223 ntBASIC18.65■□□□□ 0.58
CHGBP05060 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHGBP05060 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CHGBP05060 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.65■□□□□ 0.58
CHGBP05060 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHGBP05060 AC010319.3-201ENST00000597028 470 ntBASIC18.65■□□□□ 0.58
CHGBP05060 CU634019.7-201ENST00000624153 1185 ntBASIC18.65■□□□□ 0.58
CHGBP05060 FP236241.2-201ENST00000624906 1185 ntBASIC18.65■□□□□ 0.58
CHGBP05060 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHGBP05060 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHGBP05060 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHGBP05060 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHGBP05060 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.65■□□□□ 0.58
CHGBP05060 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHGBP05060 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHGBP05060 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHGBP05060 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHGBP05060 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHGBP05060 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.65■□□□□ 0.58
CHGBP05060 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.65■□□□□ 0.58
CHGBP05060 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHGBP05060 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHGBP05060 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHGBP05060 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHGBP05060 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CHGBP05060 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CHGBP05060 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHGBP05060 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHGBP05060 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CHGBP05060 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CHGBP05060 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHGBP05060 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.64■□□□□ 0.57
CHGBP05060 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHGBP05060 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHGBP05060 AL512384.1-201ENST00000406683 331 ntBASIC18.64■□□□□ 0.57
CHGBP05060 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.64■□□□□ 0.57
CHGBP05060 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHGBP05060 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.64■□□□□ 0.57
CHGBP05060 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.64■□□□□ 0.57
CHGBP05060 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.64■□□□□ 0.57
CHGBP05060 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.64■□□□□ 0.57
CHGBP05060 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.64■□□□□ 0.57
CHGBP05060 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHGBP05060 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.64■□□□□ 0.57
CHGBP05060 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.64■□□□□ 0.57
CHGBP05060 AC027307.3-201ENST00000594262 1100 ntBASIC18.64■□□□□ 0.57
CHGBP05060 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHGBP05060 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHGBP05060 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHGBP05060 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHGBP05060 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.64■□□□□ 0.57
CHGBP05060 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHGBP05060 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHGBP05060 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.64■□□□□ 0.57
CHGBP05060 CU639417.3-201ENST00000624240 1404 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms