Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
TRGV3P03979 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.34□□□□□ -0.43
TRGV3P03979 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TRGV3P03979 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV3P03979 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV3P03979 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV3P03979 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV3P03979 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.34□□□□□ -0.43
TRGV3P03979 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.34□□□□□ -0.43
TRGV3P03979 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.34□□□□□ -0.43
TRGV3P03979 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV3P03979 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV3P03979 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV3P03979 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TRGV3P03979 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV3P03979 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TRGV3P03979 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.34□□□□□ -0.43
TRGV3P03979 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV3P03979 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.34□□□□□ -0.43
TRGV3P03979 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.34□□□□□ -0.43
TRGV3P03979 AC004890.2-204ENST00000481968 304 ntBASIC12.34□□□□□ -0.43
TRGV3P03979 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.34□□□□□ -0.43
TRGV3P03979 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.34□□□□□ -0.43
TRGV3P03979 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.34□□□□□ -0.43
TRGV3P03979 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TRGV3P03979 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.34□□□□□ -0.43
TRGV3P03979 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV3P03979 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.34□□□□□ -0.43
TRGV3P03979 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.34□□□□□ -0.43
TRGV3P03979 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TRGV3P03979 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.34□□□□□ -0.43
TRGV3P03979 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.34□□□□□ -0.43
TRGV3P03979 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.34□□□□□ -0.43
TRGV3P03979 AL355385.1-201ENST00000606123 409 ntBASIC12.34□□□□□ -0.43
TRGV3P03979 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV3P03979 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.34□□□□□ -0.43
TRGV3P03979 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV3P03979 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV3P03979 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV3P03979 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV3P03979 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV3P03979 AC023824.1-201ENST00000562945 2975 ntBASIC12.34□□□□□ -0.43
TRGV3P03979 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV3P03979 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
TRGV3P03979 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV3P03979 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.34□□□□□ -0.43
TRGV3P03979 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV3P03979 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV3P03979 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TRGV3P03979 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV3P03979 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV3P03979 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV3P03979 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
TRGV3P03979 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.33□□□□□ -0.43
TRGV3P03979 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
TRGV3P03979 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.33□□□□□ -0.44
TRGV3P03979 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.33□□□□□ -0.44
TRGV3P03979 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.33□□□□□ -0.44
TRGV3P03979 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TRGV3P03979 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TRGV3P03979 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.33□□□□□ -0.44
TRGV3P03979 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.33□□□□□ -0.44
TRGV3P03979 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.33□□□□□ -0.44
TRGV3P03979 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.33□□□□□ -0.44
TRGV3P03979 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.33□□□□□ -0.44
TRGV3P03979 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.33□□□□□ -0.44
TRGV3P03979 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.33□□□□□ -0.44
TRGV3P03979 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.33□□□□□ -0.44
TRGV3P03979 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.33□□□□□ -0.44
TRGV3P03979 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.33□□□□□ -0.44
TRGV3P03979 AC135586.1-201ENST00000539323 574 ntBASIC12.33□□□□□ -0.44
TRGV3P03979 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.33□□□□□ -0.44
TRGV3P03979 TIMM17BP1-201ENST00000545713 516 ntBASIC12.33□□□□□ -0.44
TRGV3P03979 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.33□□□□□ -0.44
TRGV3P03979 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 AC097359.3-201ENST00000603982 1210 ntBASIC12.33□□□□□ -0.44
TRGV3P03979 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.33□□□□□ -0.44
TRGV3P03979 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV3P03979 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.33□□□□□ -0.44
TRGV3P03979 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.33□□□□□ -0.44
TRGV3P03979 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms