Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
LMNAP02545 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.41■□□□□ 0.22
LMNAP02545 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LMNAP02545 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LMNAP02545 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LMNAP02545 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LMNAP02545 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LMNAP02545 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LMNAP02545 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
LMNAP02545 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LMNAP02545 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMNAP02545 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMNAP02545 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LMNAP02545 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMNAP02545 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LMNAP02545 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMNAP02545 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.4■□□□□ 0.22
LMNAP02545 FOXO1B-201ENST00000504678 1527 ntBASIC16.4■□□□□ 0.22
LMNAP02545 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LMNAP02545 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMNAP02545 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMNAP02545 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMNAP02545 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
LMNAP02545 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.4■□□□□ 0.22
LMNAP02545 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.4■□□□□ 0.22
LMNAP02545 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.4■□□□□ 0.22
LMNAP02545 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LMNAP02545 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LMNAP02545 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.4■□□□□ 0.22
LMNAP02545 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.4■□□□□ 0.22
LMNAP02545 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.4■□□□□ 0.22
LMNAP02545 CTBP2P5-201ENST00000454986 1264 ntBASIC16.4■□□□□ 0.22
LMNAP02545 PFN1P12-201ENST00000455938 534 ntBASIC16.4■□□□□ 0.22
LMNAP02545 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.4■□□□□ 0.22
LMNAP02545 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.4■□□□□ 0.22
LMNAP02545 SERBP1P3-201ENST00000459980 809 ntBASIC16.4■□□□□ 0.22
LMNAP02545 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.4■□□□□ 0.22
LMNAP02545 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
LMNAP02545 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LMNAP02545 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.4■□□□□ 0.22
LMNAP02545 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.4■□□□□ 0.22
LMNAP02545 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LMNAP02545 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.4■□□□□ 0.22
LMNAP02545 WFDC1-204ENST00000613603 549 ntBASIC16.4■□□□□ 0.22
LMNAP02545 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.4■□□□□ 0.22
LMNAP02545 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LMNAP02545 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMNAP02545 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMNAP02545 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LMNAP02545 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LMNAP02545 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.4■□□□□ 0.22
LMNAP02545 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
LMNAP02545 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMNAP02545 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
LMNAP02545 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.4■□□□□ 0.22
LMNAP02545 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMNAP02545 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.4■□□□□ 0.22
LMNAP02545 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
LMNAP02545 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
LMNAP02545 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
LMNAP02545 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LMNAP02545 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.39■□□□□ 0.21
LMNAP02545 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMNAP02545 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LMNAP02545 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMNAP02545 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LMNAP02545 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMNAP02545 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMNAP02545 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMNAP02545 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMNAP02545 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMNAP02545 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LMNAP02545 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.39■□□□□ 0.21
LMNAP02545 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.39■□□□□ 0.21
LMNAP02545 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.39■□□□□ 0.21
LMNAP02545 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.39■□□□□ 0.21
LMNAP02545 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
LMNAP02545 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LMNAP02545 RNA5SP412-201ENST00000516234 123 ntBASIC16.39■□□□□ 0.21
LMNAP02545 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LMNAP02545 BANF1P1-201ENST00000553684 263 ntBASIC16.39■□□□□ 0.21
LMNAP02545 AC023310.3-201ENST00000557027 670 ntBASIC16.39■□□□□ 0.21
LMNAP02545 AC100756.1-201ENST00000562736 682 ntBASIC16.39■□□□□ 0.21
LMNAP02545 AC138749.3-201ENST00000567691 622 ntBASIC16.39■□□□□ 0.21
LMNAP02545 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.39■□□□□ 0.21
LMNAP02545 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.39■□□□□ 0.21
LMNAP02545 AC116165.1-201ENST00000611806 668 ntBASIC16.39■□□□□ 0.21
LMNAP02545 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.39■□□□□ 0.21
LMNAP02545 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.39■□□□□ 0.21
LMNAP02545 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.39■□□□□ 0.21
LMNAP02545 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMNAP02545 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMNAP02545 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LMNAP02545 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.39■□□□□ 0.21
LMNAP02545 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.39■□□□□ 0.21
LMNAP02545 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.39■□□□□ 0.21
LMNAP02545 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LMNAP02545 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMNAP02545 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMNAP02545 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms