Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RN7SL190P-201ENST00000582519 257 ntBASIC18.51■□□□□ 0.55
COL1A1P02452 AL021578.1-201ENST00000613646 709 ntBASIC18.51■□□□□ 0.55
COL1A1P02452 AC132938.4-201ENST00000623835 848 ntBASIC18.51■□□□□ 0.55
COL1A1P02452 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.51■□□□□ 0.55
COL1A1P02452 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.51■□□□□ 0.55
COL1A1P02452 AL359258.3-201ENST00000622910 2331 ntBASIC18.51■□□□□ 0.55
COL1A1P02452 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
COL1A1P02452 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.51■□□□□ 0.55
COL1A1P02452 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
COL1A1P02452 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL1A1P02452 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL1A1P02452 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
COL1A1P02452 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.5■□□□□ 0.55
COL1A1P02452 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.5■□□□□ 0.55
COL1A1P02452 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.5■□□□□ 0.55
COL1A1P02452 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.5■□□□□ 0.55
COL1A1P02452 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL1A1P02452 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL1A1P02452 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL1A1P02452 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.5■□□□□ 0.55
COL1A1P02452 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL1A1P02452 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL1A1P02452 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL1A1P02452 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL1A1P02452 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC18.5■□□□□ 0.55
COL1A1P02452 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL1A1P02452 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
COL1A1P02452 NUS1P3-201ENST00000423502 862 ntBASIC18.5■□□□□ 0.55
COL1A1P02452 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.5■□□□□ 0.55
COL1A1P02452 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.5■□□□□ 0.55
COL1A1P02452 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC18.5■□□□□ 0.55
COL1A1P02452 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC18.5■□□□□ 0.55
COL1A1P02452 AC073413.1-201ENST00000603927 732 ntBASIC18.5■□□□□ 0.55
COL1A1P02452 AC244452.3-201ENST00000636814 210 ntBASIC18.5■□□□□ 0.55
COL1A1P02452 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC18.5■□□□□ 0.55
COL1A1P02452 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL1A1P02452 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC18.5■□□□□ 0.55
COL1A1P02452 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
COL1A1P02452 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL1A1P02452 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL1A1P02452 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL1A1P02452 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL1A1P02452 AL354989.2-201ENST00000435838 1540 ntBASIC18.49■□□□□ 0.55
COL1A1P02452 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
COL1A1P02452 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL1A1P02452 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL1A1P02452 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL1A1P02452 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
COL1A1P02452 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
COL1A1P02452 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL1A1P02452 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL1A1P02452 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL1A1P02452 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL1A1P02452 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.49■□□□□ 0.55
COL1A1P02452 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.49■□□□□ 0.55
COL1A1P02452 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL1A1P02452 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.49■□□□□ 0.55
COL1A1P02452 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.49■□□□□ 0.55
COL1A1P02452 RPSAP36-202ENST00000494591 1261 ntBASIC18.49■□□□□ 0.55
COL1A1P02452 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.49■□□□□ 0.55
COL1A1P02452 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC18.49■□□□□ 0.55
COL1A1P02452 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC18.49■□□□□ 0.55
COL1A1P02452 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.49■□□□□ 0.55
COL1A1P02452 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC18.49■□□□□ 0.55
COL1A1P02452 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.49■□□□□ 0.55
COL1A1P02452 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL1A1P02452 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL1A1P02452 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.49■□□□□ 0.55
COL1A1P02452 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL1A1P02452 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
COL1A1P02452 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
COL1A1P02452 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL1A1P02452 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL1A1P02452 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL1A1P02452 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.49■□□□□ 0.55
COL1A1P02452 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
COL1A1P02452 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
COL1A1P02452 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC18.49■□□□□ 0.55
COL1A1P02452 REXO1L5P-201ENST00000622260 2098 ntBASIC18.48■□□□□ 0.55
COL1A1P02452 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL1A1P02452 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
COL1A1P02452 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.48■□□□□ 0.55
COL1A1P02452 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL1A1P02452 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL1A1P02452 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
COL1A1P02452 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL1A1P02452 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.48■□□□□ 0.55
COL1A1P02452 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL1A1P02452 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL1A1P02452 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.48■□□□□ 0.55
COL1A1P02452 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
COL1A1P02452 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL1A1P02452 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
COL1A1P02452 AC106820.3-201ENST00000561653 397 ntBASIC18.48■□□□□ 0.55
COL1A1P02452 DUX4L47-201ENST00000566374 394 ntBASIC18.48■□□□□ 0.55
COL1A1P02452 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.48■□□□□ 0.55
COL1A1P02452 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.48■□□□□ 0.55
COL1A1P02452 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL1A1P02452 AC020914.3-201ENST00000594712 304 ntBASIC18.48■□□□□ 0.55
COL1A1P02452 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms