Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 WASH3P-207ENST00000560956 1394 ntBASIC11.82□□□□□ -0.52
HLA-DQA1P01909 FO538757.1-201ENST00000623083 1397 ntBASIC11.82□□□□□ -0.52
HLA-DQA1P01909 AC016734.2-201ENST00000624325 1377 ntBASIC11.82□□□□□ -0.52
HLA-DQA1P01909 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 SPDYE21P-201ENST00000413323 827 ntBASIC11.82□□□□□ -0.52
HLA-DQA1P01909 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 AP000867.3-201ENST00000524675 377 ntBASIC11.82□□□□□ -0.52
HLA-DQA1P01909 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 BCL10-202ENST00000620248 774 ntTSL 5 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 DGCR9-201ENST00000609630 2415 ntBASIC11.82□□□□□ -0.52
HLA-DQA1P01909 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 AC011474.4-201ENST00000623523 2076 ntBASIC11.82□□□□□ -0.52
HLA-DQA1P01909 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC11.82□□□□□ -0.52
HLA-DQA1P01909 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 AC127383.1-201ENST00000444697 1800 ntBASIC11.81□□□□□ -0.52
HLA-DQA1P01909 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 UPK3BP1-201ENST00000428678 509 ntBASIC11.81□□□□□ -0.52
HLA-DQA1P01909 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 AC096582.2-201ENST00000510860 516 ntBASIC11.81□□□□□ -0.52
HLA-DQA1P01909 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 TPM1-226ENST00000560959 925 ntTSL 2 BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 AC074051.2-201ENST00000565115 352 ntBASIC11.81□□□□□ -0.52
HLA-DQA1P01909 AL353135.1-201ENST00000606729 504 ntBASIC11.81□□□□□ -0.52
HLA-DQA1P01909 AC092119.3-201ENST00000612618 583 ntBASIC11.81□□□□□ -0.52
HLA-DQA1P01909 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC11.81□□□□□ -0.52
HLA-DQA1P01909 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DQA1P01909 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms