Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 FAM86LP-201ENST00000478302 853 ntBASIC18.6■□□□□ 0.57
FOXN1O15353 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
FOXN1O15353 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC18.6■□□□□ 0.57
FOXN1O15353 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.6■□□□□ 0.57
FOXN1O15353 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.6■□□□□ 0.57
FOXN1O15353 AL133499.1-201ENST00000596207 608 ntBASIC18.6■□□□□ 0.57
FOXN1O15353 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC18.6■□□□□ 0.57
FOXN1O15353 AL096828.3-201ENST00000615354 462 ntBASIC18.6■□□□□ 0.57
FOXN1O15353 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
FOXN1O15353 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.6■□□□□ 0.57
FOXN1O15353 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.6■□□□□ 0.57
FOXN1O15353 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.6■□□□□ 0.57
FOXN1O15353 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.6■□□□□ 0.57
FOXN1O15353 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.6■□□□□ 0.57
FOXN1O15353 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN1O15353 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN1O15353 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN1O15353 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN1O15353 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.59■□□□□ 0.57
FOXN1O15353 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN1O15353 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN1O15353 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN1O15353 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.59■□□□□ 0.57
FOXN1O15353 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
FOXN1O15353 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN1O15353 AC134915.1-201ENST00000426461 574 ntBASIC18.59■□□□□ 0.57
FOXN1O15353 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN1O15353 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.59■□□□□ 0.57
FOXN1O15353 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
FOXN1O15353 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC18.59■□□□□ 0.57
FOXN1O15353 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC18.59■□□□□ 0.57
FOXN1O15353 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC18.59■□□□□ 0.57
FOXN1O15353 RN7SL736P-201ENST00000613111 269 ntBASIC18.59■□□□□ 0.57
FOXN1O15353 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.59■□□□□ 0.57
FOXN1O15353 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN1O15353 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN1O15353 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN1O15353 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN1O15353 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
FOXN1O15353 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
FOXN1O15353 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN1O15353 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.59■□□□□ 0.57
FOXN1O15353 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN1O15353 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.59■□□□□ 0.57
FOXN1O15353 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
FOXN1O15353 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN1O15353 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
FOXN1O15353 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.58■□□□□ 0.57
FOXN1O15353 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.58■□□□□ 0.57
FOXN1O15353 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.58■□□□□ 0.57
FOXN1O15353 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.58■□□□□ 0.57
FOXN1O15353 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXN1O15353 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.58■□□□□ 0.56
FOXN1O15353 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN1O15353 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN1O15353 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.58■□□□□ 0.56
FOXN1O15353 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.58■□□□□ 0.56
FOXN1O15353 SPTLC1P5-201ENST00000450718 252 ntBASIC18.58■□□□□ 0.56
FOXN1O15353 AC093433.1-201ENST00000458048 571 ntBASIC18.58■□□□□ 0.56
FOXN1O15353 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.58■□□□□ 0.56
FOXN1O15353 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC18.58■□□□□ 0.56
FOXN1O15353 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC18.58■□□□□ 0.56
FOXN1O15353 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC18.58■□□□□ 0.56
FOXN1O15353 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
FOXN1O15353 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.58■□□□□ 0.56
FOXN1O15353 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC18.58■□□□□ 0.56
FOXN1O15353 NKG7-204ENST00000595217 816 ntTSL 2 BASIC18.58■□□□□ 0.56
FOXN1O15353 AP000346.4-201ENST00000614827 381 ntBASIC18.58■□□□□ 0.56
FOXN1O15353 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.58■□□□□ 0.56
FOXN1O15353 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN1O15353 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN1O15353 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN1O15353 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN1O15353 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
FOXN1O15353 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.58■□□□□ 0.56
FOXN1O15353 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
FOXN1O15353 AC105917.1-201ENST00000506637 2539 ntBASIC18.58■□□□□ 0.56
FOXN1O15353 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN1O15353 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN1O15353 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
FOXN1O15353 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN1O15353 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN1O15353 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.57■□□□□ 0.56
FOXN1O15353 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.57■□□□□ 0.56
FOXN1O15353 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXN1O15353 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN1O15353 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN1O15353 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms