Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
UPK1AO00322 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1AO00322 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
UPK1AO00322 AC136604.1-201ENST00000418535 575 ntBASIC14.82□□□□□ -0.04
UPK1AO00322 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.82□□□□□ -0.04
UPK1AO00322 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1AO00322 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.82□□□□□ -0.04
UPK1AO00322 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.82□□□□□ -0.04
UPK1AO00322 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
UPK1AO00322 AC025678.2-201ENST00000562061 970 ntBASIC14.82□□□□□ -0.04
UPK1AO00322 AC004449.1-201ENST00000564240 433 ntBASIC14.82□□□□□ -0.04
UPK1AO00322 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.82□□□□□ -0.04
UPK1AO00322 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.82□□□□□ -0.04
UPK1AO00322 AL589739.1-201ENST00000607720 493 ntBASIC14.82□□□□□ -0.04
UPK1AO00322 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.82□□□□□ -0.04
UPK1AO00322 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1AO00322 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1AO00322 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1AO00322 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.82□□□□□ -0.04
UPK1AO00322 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
UPK1AO00322 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
UPK1AO00322 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.82□□□□□ -0.04
UPK1AO00322 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1AO00322 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1AO00322 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.82□□□□□ -0.04
UPK1AO00322 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1AO00322 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1AO00322 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.82□□□□□ -0.04
UPK1AO00322 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1AO00322 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1AO00322 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1AO00322 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
UPK1AO00322 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
UPK1AO00322 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.81□□□□□ -0.04
UPK1AO00322 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.81□□□□□ -0.04
UPK1AO00322 CETN4P-206ENST00000642099 2168 ntBASIC14.81□□□□□ -0.04
UPK1AO00322 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1AO00322 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1AO00322 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1AO00322 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1AO00322 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1AO00322 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1AO00322 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1AO00322 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1AO00322 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1AO00322 CNN2P2-201ENST00000443536 909 ntBASIC14.81□□□□□ -0.04
UPK1AO00322 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1AO00322 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.81□□□□□ -0.04
UPK1AO00322 CNN2P3-201ENST00000450201 906 ntBASIC14.81□□□□□ -0.04
UPK1AO00322 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1AO00322 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.81□□□□□ -0.04
UPK1AO00322 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.81□□□□□ -0.04
UPK1AO00322 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.81□□□□□ -0.04
UPK1AO00322 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.81□□□□□ -0.04
UPK1AO00322 AL136317.3-201ENST00000618497 906 ntBASIC14.81□□□□□ -0.04
UPK1AO00322 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.81□□□□□ -0.04
UPK1AO00322 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.81□□□□□ -0.04
UPK1AO00322 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.81□□□□□ -0.04
UPK1AO00322 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
UPK1AO00322 TUBB3P1-201ENST00000405796 1332 ntBASIC14.81□□□□□ -0.04
UPK1AO00322 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
UPK1AO00322 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
UPK1AO00322 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.81□□□□□ -0.04
UPK1AO00322 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1AO00322 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.81□□□□□ -0.04
UPK1AO00322 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
UPK1AO00322 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
UPK1AO00322 AL607033.1-201ENST00000623900 1599 ntBASIC14.81□□□□□ -0.04
UPK1AO00322 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1AO00322 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1AO00322 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1AO00322 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1AO00322 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1AO00322 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1AO00322 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.81□□□□□ -0.04
UPK1AO00322 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
UPK1AO00322 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.81□□□□□ -0.04
UPK1AO00322 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.8□□□□□ -0.04
UPK1AO00322 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.8□□□□□ -0.04
UPK1AO00322 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 AC148477.4-201ENST00000613430 1793 ntBASIC14.8□□□□□ -0.04
UPK1AO00322 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
UPK1AO00322 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
UPK1AO00322 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 AC140479.7-201ENST00000636301 2332 ntBASIC14.8□□□□□ -0.04
UPK1AO00322 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.8□□□□□ -0.04
UPK1AO00322 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1AO00322 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
UPK1AO00322 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms