Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 MIR4497-201ENST00000583208 89 ntBASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AC112497.1-201ENST00000624824 639 ntBASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AP002761.4-201ENST00000565433 3361 ntBASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AC134407.3-201ENST00000624035 2139 ntBASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AL592424.1-201ENST00000563624 1536 ntBASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AC010460.3-201ENST00000511359 1579 ntBASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AC015819.3-201ENST00000624305 2674 ntBASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AC092338.2-201ENST00000568827 1415 ntBASIC13.65□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.65□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 AC138969.2-201ENST00000532739 9932 ntBASIC13.65□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.65□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.65□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BOLA2-SMG1P6H3BVE0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms