Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 PIN1P1-201ENST00000412108 996 ntBASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 WDR53-203ENST00000429115 683 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 DFFBP1-201ENST00000433250 979 ntBASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 AC027307.3-201ENST00000594262 1100 ntBASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 AC004840.1-201ENST00000636359 365 ntBASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM9A6NGZ8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 KRT18P43-201ENST00000469825 1281 ntBASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 AC104596.2-201ENST00000512793 793 ntBASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 AC055876.2-201ENST00000531834 546 ntBASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 TPRX2P-201ENST00000535362 881 ntBASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 RARRES2P5-201ENST00000564013 466 ntBASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 MIR3197-201ENST00000582241 73 ntBASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 AC099568.2-201ENST00000609194 695 ntBASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 CYP2AB1P-202ENST00000454440 1456 ntBASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM9A6NGZ8 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms