Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 MEP1AP4-201ENST00000423244 1087 ntBASIC14.84□□□□□ -0.03
LRIT2A6NDA9 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 FAM207CP-201ENST00000443486 507 ntBASIC14.84□□□□□ -0.03
LRIT2A6NDA9 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRIT2A6NDA9 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.83□□□□□ -0.03
LRIT2A6NDA9 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
LRIT2A6NDA9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LRIT2A6NDA9 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
LRIT2A6NDA9 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LRIT2A6NDA9 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.83□□□□□ -0.03
LRIT2A6NDA9 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LRIT2A6NDA9 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.03
LRIT2A6NDA9 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LRIT2A6NDA9 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 AC126365.1-201ENST00000578585 1514 ntBASIC14.83□□□□□ -0.04
LRIT2A6NDA9 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 AC006486.2-201ENST00000624246 2199 ntBASIC14.83□□□□□ -0.04
LRIT2A6NDA9 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 MIR661-201ENST00000384842 89 ntBASIC14.83□□□□□ -0.04
LRIT2A6NDA9 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 AC025181.2-201ENST00000606994 802 ntBASIC14.83□□□□□ -0.04
LRIT2A6NDA9 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRIT2A6NDA9 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 AL136379.1-201ENST00000623471 2642 ntBASIC14.82□□□□□ -0.04
LRIT2A6NDA9 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 AC093004.1-201ENST00000508850 424 ntBASIC14.82□□□□□ -0.04
LRIT2A6NDA9 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.82□□□□□ -0.04
LRIT2A6NDA9 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms