Protein–RNA interactions for Protein: Q9Y2K6

USP20, Ubiquitin carboxyl-terminal hydrolase 20, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP20Q9Y2K6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP20Q9Y2K6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP20Q9Y2K6 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
USP20Q9Y2K6 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP20Q9Y2K6 KRT18P43-201ENST00000469825 1281 ntBASIC17.11■□□□□ 0.33
USP20Q9Y2K6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
USP20Q9Y2K6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.11■□□□□ 0.33
USP20Q9Y2K6 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.11■□□□□ 0.33
USP20Q9Y2K6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.11■□□□□ 0.33
USP20Q9Y2K6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP20Q9Y2K6 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.11■□□□□ 0.33
USP20Q9Y2K6 BRI3BPP1-201ENST00000594224 787 ntBASIC17.11■□□□□ 0.33
USP20Q9Y2K6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP20Q9Y2K6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.11■□□□□ 0.33
USP20Q9Y2K6 AL033527.5-201ENST00000641382 801 ntBASIC17.11■□□□□ 0.33
USP20Q9Y2K6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP20Q9Y2K6 AC063926.2-201ENST00000623766 1308 ntBASIC17.11■□□□□ 0.33
USP20Q9Y2K6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP20Q9Y2K6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.11■□□□□ 0.33
USP20Q9Y2K6 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
USP20Q9Y2K6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP20Q9Y2K6 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.11■□□□□ 0.33
USP20Q9Y2K6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP20Q9Y2K6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP20Q9Y2K6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 AC098614.1-201ENST00000368528 745 ntBASIC17.1■□□□□ 0.33
USP20Q9Y2K6 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 AL049840.4-201ENST00000602422 811 ntBASIC17.1■□□□□ 0.33
USP20Q9Y2K6 AL358472.5-202ENST00000641448 1267 ntBASIC17.1■□□□□ 0.33
USP20Q9Y2K6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 CU639417.3-201ENST00000624240 1404 ntBASIC17.1■□□□□ 0.33
USP20Q9Y2K6 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.1■□□□□ 0.33
USP20Q9Y2K6 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP20Q9Y2K6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 AL512384.1-201ENST00000406683 331 ntBASIC17.09■□□□□ 0.33
USP20Q9Y2K6 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 AC015910.1-201ENST00000579400 975 ntBASIC17.09■□□□□ 0.33
USP20Q9Y2K6 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 PPT1-215ENST00000641471 2368 ntBASIC17.09■□□□□ 0.33
USP20Q9Y2K6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
USP20Q9Y2K6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
USP20Q9Y2K6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP20Q9Y2K6 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP20Q9Y2K6 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP20Q9Y2K6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms