Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 AC068137.2-201ENST00000605408 478 ntBASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 ZBED1P1-201ENST00000502364 1930 ntBASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 KRT8P37-201ENST00000451609 1420 ntBASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.72□□□□□ -0.21
FOXJ3Q9UPW0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 OR2I1P-209ENST00000641730 5365 ntBASIC13.71□□□□□ -0.21
FOXJ3Q9UPW0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
FOXJ3Q9UPW0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
FOXJ3Q9UPW0 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.71□□□□□ -0.22
FOXJ3Q9UPW0 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
FOXJ3Q9UPW0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
FOXJ3Q9UPW0 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
FOXJ3Q9UPW0 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
FOXJ3Q9UPW0 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
FOXJ3Q9UPW0 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
FOXJ3Q9UPW0 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
FOXJ3Q9UPW0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
FOXJ3Q9UPW0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
FOXJ3Q9UPW0 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
FOXJ3Q9UPW0 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
FOXJ3Q9UPW0 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
FOXJ3Q9UPW0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms