Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 CICP13-201ENST00000422015 2789 ntBASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 RPL7P3-201ENST00000441388 714 ntBASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 BX539320.1-201ENST00000623759 877 ntBASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
DENND2AQ9ULE3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 AC127383.1-201ENST00000444697 1800 ntBASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 AC093525.8-201ENST00000624099 1342 ntBASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 AC016694.1-201ENST00000434179 700 ntBASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 AP000812.2-201ENST00000538934 718 ntBASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.81■□□□□ 0.6
DENND2AQ9ULE3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.8■□□□□ 0.6
DENND2AQ9ULE3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
DENND2AQ9ULE3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DENND2AQ9ULE3 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.8■□□□□ 0.6
DENND2AQ9ULE3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DENND2AQ9ULE3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DENND2AQ9ULE3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DENND2AQ9ULE3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms