Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 AL662799.1-202ENST00000614205 422 ntBASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 CICP11-201ENST00000434745 2827 ntBASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 AC087499.6-201ENST00000411576 835 ntBASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 AC098850.1-201ENST00000419919 790 ntBASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 GAPDHP40-201ENST00000505218 1006 ntBASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 AC190387.1-201ENST00000551683 408 ntBASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 AC006486.2-201ENST00000624246 2199 ntBASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.97■□□□□ 0.63
ECHDC1Q9NTX5 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 AC123567.1-201ENST00000548294 1261 ntBASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 BRI3BPP1-201ENST00000594224 787 ntBASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 AL645728.2-202ENST00000641679 227 ntBASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 AC148477.4-201ENST00000613430 1793 ntBASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ECHDC1Q9NTX5 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC1Q9NTX5 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ECHDC1Q9NTX5 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms