Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 AC136604.1-201ENST00000418535 575 ntBASIC13.41□□□□□ -0.26
GCM1Q9NP62 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 FAM8A3P-201ENST00000427218 844 ntBASIC13.41□□□□□ -0.26
GCM1Q9NP62 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 AC135586.1-201ENST00000539323 574 ntBASIC13.41□□□□□ -0.26
GCM1Q9NP62 HNRNPUP1-201ENST00000554987 333 ntBASIC13.41□□□□□ -0.26
GCM1Q9NP62 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 AC004840.1-201ENST00000636359 365 ntBASIC13.41□□□□□ -0.26
GCM1Q9NP62 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GCM1Q9NP62 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GCM1Q9NP62 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
GCM1Q9NP62 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
GCM1Q9NP62 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
GCM1Q9NP62 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GCM1Q9NP62 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
GCM1Q9NP62 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
GCM1Q9NP62 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GCM1Q9NP62 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GCM1Q9NP62 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GCM1Q9NP62 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GCM1Q9NP62 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GCM1Q9NP62 AC114501.2-201ENST00000439631 535 ntBASIC13.4□□□□□ -0.26
GCM1Q9NP62 TARDBPP1-201ENST00000442013 1203 ntBASIC13.4□□□□□ -0.26
GCM1Q9NP62 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 MIR4745-201ENST00000577608 62 ntBASIC13.4□□□□□ -0.26
GCM1Q9NP62 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 AC092364.2-202ENST00000597012 1073 ntBASIC13.4□□□□□ -0.26
GCM1Q9NP62 AC009118.2-201ENST00000613275 655 ntBASIC13.4□□□□□ -0.26
GCM1Q9NP62 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.4□□□□□ -0.26
GCM1Q9NP62 AC004461.2-201ENST00000629517 803 ntBASIC13.4□□□□□ -0.26
GCM1Q9NP62 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GCM1Q9NP62 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GCM1Q9NP62 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GCM1Q9NP62 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GCM1Q9NP62 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GCM1Q9NP62 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.4□□□□□ -0.26
GCM1Q9NP62 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GCM1Q9NP62 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GCM1Q9NP62 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
GCM1Q9NP62 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.27
GCM1Q9NP62 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.27
GCM1Q9NP62 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.39□□□□□ -0.27
GCM1Q9NP62 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GCM1Q9NP62 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms