Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CD248Q9HCU0 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
CD248Q9HCU0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.52■□□□□ 0.24
CD248Q9HCU0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
CD248Q9HCU0 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD248Q9HCU0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD248Q9HCU0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.52■□□□□ 0.24
CD248Q9HCU0 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CD248Q9HCU0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.52■□□□□ 0.24
CD248Q9HCU0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CD248Q9HCU0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.52■□□□□ 0.24
CD248Q9HCU0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.52■□□□□ 0.24
CD248Q9HCU0 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CD248Q9HCU0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CD248Q9HCU0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD248Q9HCU0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.52■□□□□ 0.24
CD248Q9HCU0 API5-211ENST00000534695 560 ntTSL 5 BASIC16.52■□□□□ 0.24
CD248Q9HCU0 AC061975.2-201ENST00000581722 295 ntBASIC16.52■□□□□ 0.24
CD248Q9HCU0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.52■□□□□ 0.24
CD248Q9HCU0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.52■□□□□ 0.24
CD248Q9HCU0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.52■□□□□ 0.24
CD248Q9HCU0 AC004790.1-201ENST00000612686 536 ntBASIC16.52■□□□□ 0.24
CD248Q9HCU0 AL358472.5-202ENST00000641448 1267 ntBASIC16.52■□□□□ 0.24
CD248Q9HCU0 AC107918.4-201ENST00000641966 3141 ntBASIC16.52■□□□□ 0.24
CD248Q9HCU0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD248Q9HCU0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.52■□□□□ 0.24
CD248Q9HCU0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.52■□□□□ 0.23
CD248Q9HCU0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD248Q9HCU0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.52■□□□□ 0.23
CD248Q9HCU0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.52■□□□□ 0.23
CD248Q9HCU0 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD248Q9HCU0 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.52■□□□□ 0.23
CD248Q9HCU0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CD248Q9HCU0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.52■□□□□ 0.23
CD248Q9HCU0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD248Q9HCU0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.52■□□□□ 0.23
CD248Q9HCU0 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD248Q9HCU0 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
CD248Q9HCU0 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CD248Q9HCU0 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.52■□□□□ 0.23
CD248Q9HCU0 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CD248Q9HCU0 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.52■□□□□ 0.23
CD248Q9HCU0 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CD248Q9HCU0 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD248Q9HCU0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD248Q9HCU0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD248Q9HCU0 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD248Q9HCU0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 LINC00528-201ENST00000600723 2160 ntBASIC16.51■□□□□ 0.23
CD248Q9HCU0 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.51■□□□□ 0.23
CD248Q9HCU0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD248Q9HCU0 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD248Q9HCU0 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD248Q9HCU0 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD248Q9HCU0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD248Q9HCU0 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD248Q9HCU0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD248Q9HCU0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD248Q9HCU0 GK-202ENST00000378941 458 ntTSL 3 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CD248Q9HCU0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD248Q9HCU0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 RN7SL692P-201ENST00000464677 288 ntBASIC16.51■□□□□ 0.23
CD248Q9HCU0 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 AC027307.3-201ENST00000594262 1100 ntBASIC16.51■□□□□ 0.23
CD248Q9HCU0 AC004233.3-201ENST00000607794 1269 ntBASIC16.51■□□□□ 0.23
CD248Q9HCU0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD248Q9HCU0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD248Q9HCU0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 AC007292.2-201ENST00000593524 1812 ntBASIC16.51■□□□□ 0.23
CD248Q9HCU0 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD248Q9HCU0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD248Q9HCU0 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD248Q9HCU0 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.51■□□□□ 0.23
CD248Q9HCU0 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CD248Q9HCU0 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CD248Q9HCU0 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD248Q9HCU0 AL589702.1-201ENST00000641229 1509 ntBASIC16.5■□□□□ 0.23
CD248Q9HCU0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CD248Q9HCU0 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CD248Q9HCU0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms