Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 SPDYE7P-202ENST00000420373 878 ntBASIC14.44□□□□□ -0.1
TRIM2Q9C040 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 DBET-201ENST00000630918 3363 ntBASIC14.44□□□□□ -0.1
TRIM2Q9C040 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 C18orf15-201ENST00000623680 2534 ntBASIC14.44□□□□□ -0.1
TRIM2Q9C040 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 AC103702.1-201ENST00000548801 2630 ntBASIC14.44□□□□□ -0.1
TRIM2Q9C040 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.44□□□□□ -0.1
TRIM2Q9C040 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM2Q9C040 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM2Q9C040 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM2Q9C040 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRIM2Q9C040 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM2Q9C040 AL607033.1-201ENST00000623900 1599 ntBASIC14.43□□□□□ -0.1
TRIM2Q9C040 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM2Q9C040 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRIM2Q9C040 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRIM2Q9C040 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM2Q9C040 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIM2Q9C040 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRIM2Q9C040 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIM2Q9C040 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM2Q9C040 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM2Q9C040 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM2Q9C040 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM2Q9C040 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM2Q9C040 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM2Q9C040 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM2Q9C040 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
TRIM2Q9C040 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM2Q9C040 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM2Q9C040 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.43□□□□□ -0.1
TRIM2Q9C040 MTND6P24-201ENST00000440466 518 ntBASIC14.43□□□□□ -0.1
TRIM2Q9C040 FAM86GP-201ENST00000448322 971 ntBASIC14.43□□□□□ -0.1
TRIM2Q9C040 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.43□□□□□ -0.1
TRIM2Q9C040 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM2Q9C040 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.43□□□□□ -0.1
TRIM2Q9C040 AC015911.4-201ENST00000588022 1070 ntBASIC14.43□□□□□ -0.1
TRIM2Q9C040 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRIM2Q9C040 MIR6080-201ENST00000617359 66 ntBASIC14.43□□□□□ -0.1
TRIM2Q9C040 AC093512.1-201ENST00000617969 520 ntBASIC14.43□□□□□ -0.1
TRIM2Q9C040 AP001059.3-201ENST00000619053 235 ntBASIC14.43□□□□□ -0.1
TRIM2Q9C040 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM2Q9C040 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM2Q9C040 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
TRIM2Q9C040 KRT8P12-202ENST00000472924 1397 ntBASIC14.43□□□□□ -0.1
TRIM2Q9C040 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
TRIM2Q9C040 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM2Q9C040 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM2Q9C040 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM2Q9C040 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM2Q9C040 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM2Q9C040 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIM2Q9C040 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM2Q9C040 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms