Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 AL136379.1-201ENST00000623471 2642 ntBASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 AC069224.1-201ENST00000566372 1715 ntBASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 AC063926.2-201ENST00000623766 1308 ntBASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.1□□□□□ -0.31
SSBP3Q9BWW4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 AC144831.1-201ENST00000573312 2656 ntBASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 AC074338.1-201ENST00000416825 156 ntBASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 MYCLP2-201ENST00000449268 967 ntBASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 KRT17P7-201ENST00000451704 1104 ntBASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 AC018892.3-201ENST00000623986 2499 ntBASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 AC138969.3-201ENST00000546612 1459 ntBASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 AC138932.2-201ENST00000548268 1459 ntBASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 AC126755.4-201ENST00000549796 1459 ntBASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSBP3Q9BWW4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.31
SSBP3Q9BWW4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.31
SSBP3Q9BWW4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.08□□□□□ -0.31
SSBP3Q9BWW4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP3Q9BWW4 AL607033.1-201ENST00000623900 1599 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms